RNA–protein interactions: disorder, moonlighting and junk contribute to eukaryotic complexity
出版年份 2019 全文链接
标题
RNA–protein interactions: disorder, moonlighting and junk contribute to eukaryotic complexity
作者
关键词
-
出版物
Open Biology
Volume 9, Issue 6, Pages 190096
出版商
The Royal Society
发表日期
2019-06-19
DOI
10.1098/rsob.190096
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A brave new world of RNA-binding proteins
- (2018) Matthias W. Hentze et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- uvCLAP is a fast and non-radioactive method to identify in vivo targets of RNA-binding proteins
- (2018) Daniel Maticzka et al. Nature Communications
- Cotranslational assembly of protein complexes in eukaryotes revealed by ribosome profiling
- (2018) Ayala Shiber et al. NATURE
- Protein complexes assemble as they are being made
- (2018) Christine Mayr NATURE
- mRNA interactome capture in mammalian cells
- (2017) Nicolai Kastelic et al. METHODS
- NONCODEV5: a comprehensive annotation database for long non-coding RNAs
- (2017) ShuangSang Fang et al. NUCLEIC ACIDS RESEARCH
- Intrinsically disordered RGG/RG domains mediate degenerate specificity in RNA binding
- (2017) Bagdeser A. Ozdilek et al. NUCLEIC ACIDS RESEARCH
- LncRNA MEG3 downregulation mediated by DNMT3b contributes to nickel malignant transformation of human bronchial epithelial cells via modulating PHLPP1 transcription and HIF-1α translation
- (2017) C Zhou et al. ONCOGENE
- Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination
- (2017) Nana Diarra dit Konté et al. Nature Communications
- Local Nucleation of Microtubule Bundles through Tubulin Concentration into a Condensed Tau Phase
- (2017) Amayra Hernández-Vega et al. Cell Reports
- Advances and challenges in the detection of transcriptome-wide protein-RNA interactions
- (2017) Emily C. Wheeler et al. Wiley Interdisciplinary Reviews-RNA
- The new (dis)order in RNA regulation
- (2016) Aino I. Järvelin et al. Cell Communication and Signaling
- Steroid receptor RNA activator: Biologic function and role in disease
- (2016) Chan Liu et al. CLINICA CHIMICA ACTA
- The interaction of PRC2 with RNA or chromatin is mutually antagonistic
- (2016) Manuel Beltran et al. GENOME RESEARCH
- SONAR Discovers RNA-Binding Proteins from Analysis of Large-Scale Protein-Protein Interactomes
- (2016) Kristopher W. Brannan et al. MOLECULAR CELL
- An inducible long noncoding RNA amplifies DNA damage signaling
- (2016) Adam M Schmitt et al. NATURE GENETICS
- MoRFchibi SYSTEM: software tools for the identification of MoRFs in protein sequences
- (2016) Nawar Malhis et al. NUCLEIC ACIDS RESEARCH
- The expanding universe of ribonucleoproteins: of novel RNA-binding proteins and unconventional interactions
- (2016) Benedikt M. Beckmann et al. PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY
- Quantifying RNA binding sites transcriptome-wide using DO-RIP-seq
- (2016) Cindo O. Nicholson et al. RNA
- Dissecting the expression relationships between RNA-binding proteins and their cognate targets in eukaryotic post-transcriptional regulatory networks
- (2016) Sneha Nishtala et al. Scientific Reports
- catRAPIDsignature: identification of ribonucleoproteins and RNA-binding regions
- (2015) Carmen Maria Livi et al. BIOINFORMATICS
- A Cytoplasmic NF-κB Interacting Long Noncoding RNA Blocks IκB Phosphorylation and Suppresses Breast Cancer Metastasis
- (2015) Bodu Liu et al. CANCER CELL
- Phase Separation by Low Complexity Domains Promotes Stress Granule Assembly and Drives Pathological Fibrillization
- (2015) Amandine Molliex et al. CELL
- A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation
- (2015) Avinash Patel et al. CELL
- It’s Raining Liquids: RNA Tunes Viscoelasticity and Dynamics of Membraneless Organelles
- (2015) Lin Guo et al. MOLECULAR CELL
- Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins
- (2015) Yuan Lin et al. MOLECULAR CELL
- ALS/FTD Mutation-Induced Phase Transition of FUS Liquid Droplets and Reversible Hydrogels into Irreversible Hydrogels Impairs RNP Granule Function
- (2015) Tetsuro Murakami et al. NEURON
- Induced folding in RNA recognition byArabidopsis thalianaDCL1
- (2015) Irina P. Suarez et al. NUCLEIC ACIDS RESEARCH
- The recruitment of chromatin modifiers by long noncoding RNAs: lessons from PRC2
- (2015) Chen Davidovich et al. RNA
- Emerging Roles of Disordered Sequences in RNA-Binding Proteins
- (2015) Sara Calabretta et al. TRENDS IN BIOCHEMICAL SCIENCES
- Metabolic Enzymes Enjoying New Partnerships as RNA-Binding Proteins
- (2015) Alfredo Castello et al. TRENDS IN ENDOCRINOLOGY AND METABOLISM
- Extreme multifunctional proteins identified from a human protein interaction network
- (2015) Charles E. Chapple et al. Nature Communications
- The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs
- (2015) Benedikt M. Beckmann et al. Nature Communications
- The sweet side of RNA regulation: glyceraldehyde-3-phosphate dehydrogenase as a noncanonical RNA-binding protein
- (2015) Michael R. White et al. Wiley Interdisciplinary Reviews-RNA
- Promiscuous interactions and protein disaggregases determine the material state of stress-inducible RNP granules
- (2015) Sonja Kroschwald et al. eLife
- Functional Advantages of Conserved Intrinsic Disorder in RNA-Binding Proteins
- (2015) Mihaly Varadi et al. PLoS One
- Functions of double-stranded RNA-binding domains in nucleocytoplasmic transport
- (2015) Silpi Banerjee et al. RNA Biology
- High-throughput characterization of protein-RNA interactions
- (2014) K. B. Cook et al. Briefings in Functional Genomics
- A census of human RNA-binding proteins
- (2014) Stefanie Gerstberger et al. NATURE REVIEWS GENETICS
- Advantages of proteins being disordered
- (2014) Zhirong Liu et al. PROTEIN SCIENCE
- The STAT3-Binding Long Noncoding RNA lnc-DC Controls Human Dendritic Cell Differentiation
- (2014) P. Wang et al. SCIENCE
- Constitutive patterns of gene expression regulated by RNA-binding proteins
- (2014) Davide Cirillo et al. GENOME BIOLOGY
- The Arginine-Rich RNA-Binding Motif of HIV-1 Rev Is Intrinsically Disordered and Folds upon RRE Binding
- (2013) Fabio Casu et al. BIOPHYSICAL JOURNAL
- A creature with a hundred waggly tails: intrinsically disordered proteins in the ribosome
- (2013) Zhenling Peng et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- RNA in the Loop
- (2013) Johnny T.Y. Kung et al. DEVELOPMENTAL CELL
- DNMT1-interacting RNAs block gene-specific DNA methylation
- (2013) Annalisa Di Ruscio et al. NATURE
- Activating RNAs associate with Mediator to enhance chromatin architecture and transcription
- (2013) Fan Lai et al. NATURE
- A decade and a half of protein intrinsic disorder: Biology still waits for physics
- (2013) Vladimir N. Uversky PROTEIN SCIENCE
- Phosphorylation Drives a Dynamic Switch in Serine/Arginine-Rich Proteins
- (2013) ShengQi Xiang et al. STRUCTURE
- Pervasive Transcription of the Human Genome Produces Thousands of Previously Unidentified Long Intergenic Noncoding RNAs
- (2013) Matthew J. Hangauer et al. PLoS Genetics
- CRAC: an integrated approach to the analysis of RNA-seq reads
- (2013) Nicolas Philippe et al. GENOME BIOLOGY
- Human intronless genes: Functional groups, associated diseases, evolution, and mRNA processing in absence of splicing
- (2012) Ewa A. Grzybowska BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Cell-free Formation of RNA Granules: Low Complexity Sequence Domains Form Dynamic Fibers within Hydrogels
- (2012) Masato Kato et al. CELL
- Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins
- (2012) Alfredo Castello et al. CELL
- The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
- (2012) T. Derrien et al. GENOME RESEARCH
- Transcriptome-wide Analysis of Exosome Targets
- (2012) Claudia Schneider et al. MOLECULAR CELL
- RNA-guided genetic silencing systems in bacteria and archaea
- (2012) Blake Wiedenheft et al. NATURE
- The role of the 3' untranslated region in post-transcriptional regulation of protein expression in mammalian cells.
- (2012) Eva Matoulkova et al. RNA Biology
- Intrinsic Disorder in the Human Spliceosomal Proteome
- (2012) Iga Korneta et al. PLoS Computational Biology
- Attributes of short linear motifs
- (2011) Norman E. Davey et al. Molecular BioSystems
- Integrative Regulatory Mapping Indicates that the RNA-Binding Protein HuR Couples Pre-mRNA Processing and mRNA Stability
- (2011) Neelanjan Mukherjee et al. MOLECULAR CELL
- Molecular Mechanisms of Long Noncoding RNAs
- (2011) Kevin C. Wang et al. MOLECULAR CELL
- Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction
- (2011) Anh Tuân Phan et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The diverse functions of GAPDH: Views from different subcellular compartments
- (2010) Carlos Tristan et al. CELLULAR SIGNALLING
- SVM based prediction of RNA-binding proteins using binding residues and evolutionary information
- (2010) Manish Kumar et al. JOURNAL OF MOLECULAR RECOGNITION
- Long Noncoding RNA as Modular Scaffold of Histone Modification Complexes
- (2010) M.-C. Tsai et al. SCIENCE
- Noncoding RNA Gas5 Is a Growth Arrest- and Starvation-Associated Repressor of the Glucocorticoid Receptor
- (2010) T. Kino et al. Science Signaling
- The REM phase of gene regulation
- (2010) Matthias W. Hentze et al. TRENDS IN BIOCHEMICAL SCIENCES
- Close encounters of the third kind: disordered domains and the interactions of proteins
- (2009) Peter Tompa et al. BIOESSAYS
- HuR recruits let-7/RISC to repress c-Myc expression
- (2009) H. H. Kim et al. GENES & DEVELOPMENT
- How Common Are Extraribosomal Functions of Ribosomal Proteins?
- (2009) Jonathan R. Warner et al. MOLECULAR CELL
- RNA recognition motifs: boring? Not quite
- (2008) Antoine Cléry et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- The functional duality of iron regulatory protein 1
- (2008) Karl Volz CURRENT OPINION IN STRUCTURAL BIOLOGY
- Structure and function of KH domains
- (2008) Roberto Valverde et al. FEBS Journal
- Identification of a signature motif in target mRNAs of RNA-binding protein AUF1
- (2008) Krystyna Mazan-Mamczarz et al. NUCLEIC ACIDS RESEARCH
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started