Novel Genes and Metabolite Trends in Bifidobacterium longum subsp. infantis Bi-26 Metabolism of Human Milk Oligosaccharide 2′-fucosyllactose

Production of HMOs using microbial hosts — from cell engineering to large scale production

(2018) Katrine Bych et al.   CURRENT OPINION IN BIOTECHNOLOGY

Human milk oligosaccharide consumption by probiotic and human-associated bifidobacteria and lactobacilli

(2017) Taksawan Thongaram et al.   JOURNAL OF DAIRY SCIENCE

Metabolic engineering of Escherichia coli for the production of 2′-fucosyllactose and 3-fucosyllactose through modular pathway enhancement

(2017) Di Huang et al.   METABOLIC ENGINEERING

Mucin Cross-Feeding of Infant Bifidobacteria and Eubacterium hallii

(2017) Vera Bunesova et al.   MICROBIAL ECOLOGY

Trophic Interactions of Infant Bifidobacteria and Eubacterium hallii during L-Fucose and Fucosyllactose Degradation

(2017) Clarissa Schwab et al.   Frontiers in Microbiology

Persistence of Supplemented Bifidobacterium longum subsp. infantis EVC001 in Breastfed Infants

(2017) Steven A. Frese et al.   mSphere

Fucosyllactose and L-fucose utilization of infant Bifidobacterium longum and Bifidobacterium kashiwanohense

(2016) Vera Bunesova et al.   BMC MICROBIOLOGY

Formation of propionate and butyrate by the human colonic microbiota

(2016) Petra Louis et al.   ENVIRONMENTAL MICROBIOLOGY

Identification of Oligosaccharides in Feces of Breast-fed Infants and Their Correlation with the Gut Microbial Community

(2016) Jasmine C. C. Davis et al.   MOLECULAR & CELLULAR PROTEOMICS

A key genetic factor for fucosyllactose utilization affects infant gut microbiota development

(2016) Takahiro Matsuki et al.   Nature Communications

Intestinal Short Chain Fatty Acids and their Link with Diet and Human Health

(2016) David Ríos-Covián et al.   Frontiers in Microbiology

A novel gene cluster allows preferential utilization of fucosylated milk oligosaccharides in Bifidobacterium longum subsp. longum SC596

(2016) Daniel Garrido et al.   Scientific Reports

The functional biology of human milk oligosaccharides

(2015) Lars Bode   EARLY HUMAN DEVELOPMENT

Lactate and short chain fatty acids produced by microbial fermentation downregulate proinflammatory responses in intestinal epithelial cells and myeloid cells

(2015) Carolina Iraporda et al.   IMMUNOBIOLOGY

Intestinal Fucose as a Mediator of Host–Microbe Symbiosis

(2015) Joseph M. Pickard et al.   JOURNAL OF IMMUNOLOGY

Impact of human milk bacteria and oligosaccharides on neonatal gut microbiota establishment and gut health

(2015) Ted Jost et al.   NUTRITION REVIEWS

Comparative transcriptomics reveals key differences in the response to milk oligosaccharides of infant gut-associated bifidobacteria

(2015) Daniel Garrido et al.   Scientific Reports

RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes

(2015) Thomas Brettin et al.   Scientific Reports

Breast Milk Oligosaccharides: Structure-Function Relationships in the Neonate

(2014) Jennifer T. Smilowitz et al.   Annual Review of Nutrition

Cross-feeding by Bifidobacterium breve UCC2003 during co-cultivation with Bifidobacterium bifidum PRL2010 in a mucin-based medium

(2014) Muireann Egan et al.   BMC MICROBIOLOGY

Bifidobacterium longum subspecies infantis: champion colonizer of the infant gut

(2014) Mark A. Underwood et al.   PEDIATRIC RESEARCH

Variation in Consumption of Human Milk Oligosaccharides by Infant Gut-Associated Strains of Bifidobacterium breve

(2013) Santiago Ruiz-Moyano et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular dialogue between the human gut microbiota and the host: a Lactobacillus and Bifidobacterium perspective

(2013) Francesca Turroni et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Utilization of major fucosylated and sialylated human milk oligosaccharides by isolated human gut microbes

(2013) Zhuo-Teng Yu et al.   GLYCOBIOLOGY

Human milk oligosaccharides: Every baby needs a sugar mama

(2012) L. Bode   GLYCOBIOLOGY

The principal fucosylated oligosaccharides of human milk exhibit prebiotic properties on cultured infant microbiota

(2012) Zhuo-Teng Yu et al.   GLYCOBIOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

The Predominance of Type I Oligosaccharides Is a Feature Specific to Human Breast Milk

(2012) Tadasu Urashima et al.   Advances in Nutrition

Carbohydrate metabolism in Bifidobacteria

(2011) Karina Pokusaeva et al.   Genes and Nutrition

Bifidobacterial utilization of human milk oligosaccharides

(2011) David A. Sela   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Physiology of Consumption of Human Milk Oligosaccharides by Infant Gut-associated Bifidobacteria

(2011) Sadaki Asakuma et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Bifidobacteria can protect from enteropathogenic infection through production of acetate

(2011) Shinji Fukuda et al.   NATURE

Oligosaccharide Binding Proteins from Bifidobacterium longum subsp. infantis Reveal a Preference for Host Glycans

(2011) Daniel Garrido et al.   PLoS One

Consumption of Human Milk Oligosaccharides by Gut-Related Microbes

(2010) Angela Marcobal et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Nursing our microbiota: molecular linkages between bifidobacteria and milk oligosaccharides

(2010) David A. Sela et al.   TRENDS IN MICROBIOLOGY

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome

(2008) D. A. Sela et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA