Responses of tundra soil microbial communities to half a decade of experimental warming at two critical depths
出版年份 2019 全文链接
标题
Responses of tundra soil microbial communities to half a decade of experimental warming at two critical depths
作者
关键词
-
出版物
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 116, Issue 30, Pages 15096-15105
出版商
Proceedings of the National Academy of Sciences
发表日期
2019-07-09
DOI
10.1073/pnas.1901307116
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Responses of tundra soil microbial communities to half a decade of experimental warming at two critical depths
- (2019) Eric R. Johnston et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Gene expression and ultrastructure of meso- and thermophilic methanotrophic consortia
- (2018) Viola Krukenberg et al. ENVIRONMENTAL MICROBIOLOGY
- Superheat: An R Package for Creating Beautiful and Extendable Heatmaps for Visualizing Complex Data
- (2018) Rebecca L. Barter et al. JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS
- The Microbial Genomes Atlas (MiGA) webserver: taxonomic and gene diversity analysis of Archaea and Bacteria at the whole genome level
- (2018) Luis M Rodriguez-R et al. NUCLEIC ACIDS RESEARCH
- Methane efflux measured by eddy covariance in Alaskan upland tundra undergoing permafrost degradation
- (2018) M. A. Taylor et al. Journal of Geophysical Research-Biogeosciences
- Nonpareil 3: Fast Estimation of Metagenomic Coverage and Sequence Diversity
- (2018) Luis M. Rodriguez-R et al. mSystems
- Cryptic CH4 cycling in the sulfate–methane transition of marine sediments apparently mediated by ANME-1 archaea
- (2018) F. Beulig et al. ISME Journal
- Genome-centric view of carbon processing in thawing permafrost
- (2018) Ben J. Woodcroft et al. NATURE
- A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
- (2018) Donovan H Parks et al. NATURE BIOTECHNOLOGY
- High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
- (2018) Chirag Jain et al. Nature Communications
- Phosphate addition increases tropical forest soil respiration primarily by deconstraining microbial population growth
- (2018) Eric R. Johnston et al. SOIL BIOLOGY & BIOCHEMISTRY
- Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
- (2017) Donovan H. Parks et al. Nature Microbiology
- Biomass offsets little or none of permafrost carbon release from soils, streams, and wildfire: an expert assessment
- (2016) Benjamin W Abbott et al. Environmental Research Letters
- Experimental warming reveals positive feedbacks to climate change in the Eurasian Steppe
- (2016) Ximei Zhang et al. ISME Journal
- Tundra soil carbon is vulnerable to rapid microbial decomposition under climate warming
- (2016) Kai Xue et al. Nature Climate Change
- Metagenomics Reveals Pervasive Bacterial Populations and Reduced Community Diversity across the Alaska Tundra Ecosystem
- (2016) Eric R. Johnston et al. Frontiers in Microbiology
- MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets
- (2015) Yu-Wei Wu et al. BIOINFORMATICS
- CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
- (2015) Donovan H. Parks et al. GENOME RESEARCH
- Activity and interactions of methane seep microorganisms assessed by parallel transcription and FISH-NanoSIMS analyses
- (2015) Anne E Dekas et al. ISME Journal
- Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes
- (2015) Jenni Hultman et al. NATURE
- KEGG as a reference resource for gene and protein annotation
- (2015) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- A Metagenomics-Based Metabolic Model of Nitrate-Dependent Anaerobic Oxidation of Methane by Methanoperedens-Like Archaea
- (2015) Arslan Arshad et al. Frontiers in Microbiology
- The transcriptional response of microbial communities in thawing Alaskan permafrost soils
- (2015) Marco J. L. Coolen et al. Frontiers in Microbiology
- Average genome size estimation improves comparative metagenomics and sheds light on the functional ecology of the human microbiome
- (2015) Stephen Nayfach et al. GENOME BIOLOGY
- MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
- (2015) Dongwan D. Kang et al. PeerJ
- Permafrost thaw and soil moisture driving CO2 and CH4 release from upland tundra
- (2015) Susan M. Natali et al. Journal of Geophysical Research-Biogeosciences
- Estimating coverage in metagenomic data sets and why it matters
- (2014) Luis M Rodriguez-R et al. ISME Journal
- Methane dynamics regulated by microbial community response to permafrost thaw
- (2014) Carmody K. McCalley et al. NATURE
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- UniProt: a hub for protein information
- (2014) NUCLEIC ACIDS RESEARCH
- Parallel-META 2.0: Enhanced Metagenomic Data Analysis with Functional Annotation, High Performance Computing and Advanced Visualization
- (2014) Xiaoquan Su et al. PLoS One
- PEAR: a fast and accurate Illumina Paired-End reAd mergeR
- (2013) J. Zhang et al. BIOINFORMATICS
- Expert assessment of vulnerability of permafrost carbon to climate change
- (2013) E. A. G. Schuur et al. CLIMATIC CHANGE
- Trajectory of the Arctic as an integrated system
- (2013) Larry D. Hinzman et al. ECOLOGICAL APPLICATIONS
- Metagenomic Insights into Anaerobic Metabolism along an Arctic Peat Soil Profile
- (2013) David A. Lipson et al. PLoS One
- Seasonal patterns of microbial extracellular enzyme activities in an arctic tundra soil: Identifying direct and indirect effects of long-term summer warming
- (2013) Seeta A. Sistla et al. SOIL BIOLOGY & BIOCHEMISTRY
- Long-term CO2 production following permafrost thaw
- (2013) Bo Elberling et al. Nature Climate Change
- SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
- (2012) Evguenia Kopylova et al. BIOINFORMATICS
- IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
- (2012) Y. Peng et al. BIOINFORMATICS
- Thawing permafrost increases old soil and autotrophic respiration in tundra: Partitioning ecosystem respiration using δ13C and ∆14C
- (2012) Caitlin E. Hicks Pries et al. GLOBAL CHANGE BIOLOGY
- A frozen feast: thawing permafrost increases plant-available nitrogen in subarctic peatlands
- (2012) Frida Keuper et al. GLOBAL CHANGE BIOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Holocene Carbon Stocks and Carbon Accumulation Rates Altered in Soils Undergoing Permafrost Thaw
- (2011) Caitlin E. Hicks Pries et al. ECOSYSTEMS
- The rate of permafrost carbon release under aerobic and anaerobic conditions and its potential effects on climate
- (2011) Hanna Lee et al. GLOBAL CHANGE BIOLOGY
- Simulation of Present-Day and Future Permafrost and Seasonally Frozen Ground Conditions in CCSM4
- (2011) David M. Lawrence et al. JOURNAL OF CLIMATE
- Increased plant productivity in Alaskan tundra as a result of experimental warming of soil and permafrost
- (2011) Susan M. Natali et al. JOURNAL OF ECOLOGY
- Climate change: High risk of permafrost thaw
- (2011) Edward A. G. Schuur et al. NATURE
- Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw
- (2011) Rachel Mackelprang et al. NATURE
- Methane dynamics across wetland plant species
- (2010) Jenny Kao-Kniffin et al. AQUATIC BOTANY
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
- (2010) Murray P Cox et al. BMC BIOINFORMATICS
- Prodigal: prokaryotic gene recognition and translation initiation site identification
- (2010) Doug Hyatt et al. BMC BIOINFORMATICS
- Effects of experimental warming of air, soil and permafrost on carbon balance in Alaskan tundra
- (2010) SUSAN M. NATALI et al. GLOBAL CHANGE BIOLOGY
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Permafrost thermal state in the polar Northern Hemisphere during the international polar year 2007-2009: a synthesis
- (2010) Vladimir E. Romanovsky et al. PERMAFROST AND PERIGLACIAL PROCESSES
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- GLOBAL SURFACE TEMPERATURE CHANGE
- (2010) J. Hansen et al. REVIEWS OF GEOPHYSICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- Soil organic carbon pools in the northern circumpolar permafrost region
- (2009) C. Tarnocai et al. GLOBAL BIOGEOCHEMICAL CYCLES
- The effect of permafrost thaw on old carbon release and net carbon exchange from tundra
- (2009) Edward A. G. Schuur et al. NATURE
- Physical and ecological changes associated with warming permafrost and thermokarst in Interior Alaska
- (2009) T. E. Osterkamp et al. PERMAFROST AND PERIGLACIAL PROCESSES
- Methane as Fuel for Anaerobic Microorganisms
- (2008) Rudolf K. Thauer et al. Annals of the New York Academy of Sciences
- Vulnerability of Permafrost Carbon to Climate Change: Implications for the Global Carbon Cycle
- (2008) Edward A. G. Schuur et al. BIOSCIENCE
- Terrestrial ecosystem carbon dynamics and climate feedbacks
- (2008) Martin Heimann et al. NATURE
- The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
- (2008) B. L. Cantarel et al. NUCLEIC ACIDS RESEARCH
- Influence of plant species and wastewater strength on constructed wetland methane emissions and associated microbial populations
- (2007) Yanhua Wang et al. ECOLOGICAL ENGINEERING
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now