De novo transcriptome analysis of lettuce (Lactuca sativa L.) and the identification of structural genes involved in anthocyanin biosynthesis in response to UV-B radiation

Interactive Effects of UV-B Light with Abiotic Factors on Plant Growth and Chemistry, and Their Consequences for Defense against Arthropod Herbivores

(2017) Rocio Escobar-Bravo et al.   Frontiers in Plant Science

Differential transcriptome expression in human nucleus accumbens as a function of loneliness

(2016) T Canli et al.   MOLECULAR PSYCHIATRY

Effects of sodium nitroprusside (SNP) pretreatment on UV-B stress tolerance in lettuce (Lactuca sativa L.) seedlings

(2015) Aslıhan Esringu et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

De novo Transcriptome Analysis of Portunus trituberculatus Ovary and Testis by RNA-Seq: Identification of Genes Involved in Gonadal Development

(2015) Xian-liang Meng et al.   PLoS One

BrMYB4, a Suppressor of Genes for Phenylpropanoid and Anthocyanin Biosynthesis, is Down-Regulated by UV-B but not by Pigment-Inducing Sunlight in Turnip cv. Tsuda

(2014) Lili Zhang et al.   PLANT AND CELL PHYSIOLOGY

A detailed gene expression study of the Miscanthus genus reveals changes in the transcriptome associated with the rejuvenation of spring rhizomes

(2013) Adam Barling et al.   BMC GENOMICS

Molecular dissection of mercury-responsive transcriptome and sense/antisense genes in Medicago truncatula

(2013) Zhao Sheng Zhou et al.   JOURNAL OF HAZARDOUS MATERIALS

Principles of transcriptome analysis and gene expression quantification: an RNA-seq tutorial

(2013) Jochen B. W. Wolf   Molecular Ecology Resources

Photosynthesis under stressful environments: An overview

(2013) M. Ashraf et al.   PHOTOSYNTHETICA

Functional roles of flavonoids in photoprotection: New evidence, lessons from the past

(2013) Giovanni Agati et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Transcriptome Exploration in Leymus chinensis under Saline-Alkaline Treatment Using 454 Pyrosequencing

(2013) Yepeng Sun et al.   PLoS One

De Novo Transcriptome Assembly for the Tropical Grass Panicum maximum Jacq

(2013) Guilherme Toledo-Silva et al.   PLoS One

Transcriptome Analysis in Sheepgrass (Leymus chinensis): A Dominant Perennial Grass of the Eurasian Steppe

(2013) Shuangyan Chen et al.   PLoS One

Effects of UV irradiation on plants

(2012) Eissa Piri   African Journal of Microbiology Research

Evaluation of the response of maximum daily shrinkage in young cherry trees submitted to water stress cycles in a greenhouse

(2012) Ashraf Abdelfatah et al.   AGRICULTURAL WATER MANAGEMENT

A comparison of transcriptome and epigenetic status between closely related species in the genus Arabidopsis

(2012) Takahiro Kawanabe et al.   GENE

Screening of UV-B-induced genes from apple peels by SSH: possible involvement of MdCOP1-mediated signaling cascade genes in anthocyanin accumulation

(2012) Ting Peng et al.   PHYSIOLOGIA PLANTARUM

Transcriptomic Analysis of Rice (Oryza sativa) Developing Embryos Using the RNA-Seq Technique

(2012) Hong Xu et al.   PLoS One

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

(2012) Ravi K. Patel et al.   PLoS One

Genome-Wide Transcriptional Response of the Archaeon Thermococcus gammatolerans to Cadmium

(2012) Arnaud Lagorce et al.   PLoS One

RNA-Seq Analysis of the Sclerotinia homoeocarpa – Creeping Bentgrass Pathosystem

(2012) Angela M. Orshinsky et al.   PLoS One

Plant physiological responses to UV-B radiation

(2012) Zlatko S. Zlatev et al.   Emirates Journal of Food and Agriculture

Transcriptional analysis of late ripening stages of grapevine berry

(2011) Sabine Guillaumie et al.   BMC PLANT BIOLOGY

Expression analysis in response to low temperature stress in blood oranges: Implication of the flavonoid biosynthetic pathway

(2011) Tiziana Crifò et al.   GENE

Carotenoids and Their Isomers: Color Pigments in Fruits and Vegetables

(2011) Hock-Eng Khoo et al.   MOLECULES

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Evolution of C4Photosynthesis in the GenusFlaveria: How Many and Which Genes Does It Take to Make C4?

(2011) Udo Gowik et al.   PLANT CELL

The influence of ultraviolet radiation on growth, photosynthesis and phenolic levels of green and red lettuce: potential for exploiting effects of ultraviolet radiation in a production system

(2010) E. Tsormpatsidis et al.   ANNALS OF APPLIED BIOLOGY

Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types

(2010) Shaogui Guo et al.   BMC GENOMICS

Optimization of de novo transcriptome assembly from next-generation sequencing data

(2010) Y. Surget-Groba et al.   GENOME RESEARCH

Quantitative analysis, in vitro assessment of bioavailability and antioxidant activity of food carotenoids—A review

(2010) Delia B. Rodriguez-Amaya   JOURNAL OF FOOD COMPOSITION AND ANALYSIS

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Selenium accumulation in lettuce germplasm

(2010) Silvio J. Ramos et al.   PLANTA

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

SNP detection for massively parallel whole-genome resequencing

(2009) R. Li et al.   GENOME RESEARCH

Variations in constitutive and inducible UV-B tolerance; dissecting photosystem II protection in Arabidopsis thaliana accessions

(2009) Marcel A. K. Jansen et al.   PHYSIOLOGIA PLANTARUM

TheArabidopsisbZIP transcription factor HY5 regulates expression of thePFG1/MYB12gene in response to light and ultraviolet-B radiation

(2009) RALF STRACKE et al.   PLANT CELL AND ENVIRONMENT

Environmental stresses induce health-promoting phytochemicals in lettuce

(2009) Myung-Min Oh et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

(2008) Brian T. Wilhelm et al.   NATURE

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Analyzing real-time PCR data by the comparative CT method

(2008) Thomas D Schmittgen et al.   Nature Protocols

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

Arabidopsis R2R3-MYB transcription factor AtMYB60 functions as a transcriptional repressor of anthocyanin biosynthesis in lettuce (Lactuca sativa)

(2008) Jong-Sug Park et al.   PLANT CELL REPORTS