The Effect of Cofactor Binding on the Conformational Plasticity of the Biological Receptors in Artificial Metalloenzymes: The Case Study of LmrR
出版年份 2019 全文链接
标题
The Effect of Cofactor Binding on the Conformational Plasticity of the Biological Receptors in Artificial Metalloenzymes: The Case Study of LmrR
作者
关键词
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出版物
Frontiers in Chemistry
Volume 7, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2019-04-10
DOI
10.3389/fchem.2019.00211
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- An Artificial Heme Enzyme for Cyclopropanation Reactions
- (2018) Lara Villarino et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Relationship of Catalysis and Active Site Loop Dynamics in the (βα)8-Barrel Enzyme Indole-3-glycerol Phosphate Synthase
- (2018) Sandra Schlee et al. BIOCHEMISTRY
- Role of conformational dynamics in the evolution of novel enzyme function
- (2018) Miguel A. Maria-Solano et al. CHEMICAL COMMUNICATIONS
- Active site C P -loop dynamics modulate substrate binding, catalysis, oligomerization, stability, over-oxidation and recycling of 2-Cys Peroxiredoxins
- (2018) Neelagandan Kamariah et al. FREE RADICAL BIOLOGY AND MEDICINE
- A combined computational and experimental study on selective flucloxacillin hydroxylation by cytochrome P450 BM3 variants
- (2018) Rosa A. Luirink et al. JOURNAL OF INORGANIC BIOCHEMISTRY
- Active Site Gate Dynamics Modulate the Catalytic Activity of the Ubiquitination Enzyme E2-25K
- (2018) Manoj K. Rout et al. Scientific Reports
- Metal–ligand interactions in drug design
- (2018) Laura Riccardi et al. Nature Reviews Chemistry
- Protein Scaffold Activates Catalytic CO2 Hydrogenation by a Rhodium Bis(diphosphine) Complex
- (2018) Joseph A. Laureanti et al. ACS Catalysis
- Molecular dynamics simulations reveal a new role for a conserved active site asparagine in a ubiquitin-conjugating enzyme
- (2017) R. Hunter Wilson et al. JOURNAL OF MOLECULAR GRAPHICS & MODELLING
- Active Site Dynamics in Substrate Hydrolysis Catalyzed by DapE Enzyme and Its Mutants from Hybrid QM/MM-Molecular Dynamics Simulation
- (2017) Debodyuti Dutta et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Design of an enantioselective artificial metallo-hydratase enzyme containing an unnatural metal-binding amino acid
- (2017) Ivana Drienovská et al. Chemical Science
- Active-site protein dynamics and solvent accessibility in native Achromobacter cycloclastes copper nitrite reductase
- (2017) Kakali Sen et al. IUCrJ
- MDTraj: A Modern Open Library for the Analysis of Molecular Dynamics Trajectories
- (2015) Robert T. McGibbon et al. BIOPHYSICAL JOURNAL
- Supramolecular Assembly of Artificial Metalloenzymes Based on the Dimeric Protein LmrR as Promiscuous Scaffold
- (2015) Jeffrey Bos et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- PLIP: fully automated protein–ligand interaction profiler
- (2015) Sebastian Salentin et al. NUCLEIC ACIDS RESEARCH
- Novel artificial metalloenzymes by in vivo incorporation of metal-binding unnatural amino acids
- (2015) Ivana Drienovská et al. Chemical Science
- Toward the Computational Design of Artificial Metalloenzymes: From Protein–Ligand Docking to Multiscale Approaches
- (2015) Victor Muñoz Robles et al. ACS Catalysis
- The Dynamical Nature of Enzymatic Catalysis
- (2014) Robert Callender et al. ACCOUNTS OF CHEMICAL RESEARCH
- PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data
- (2013) Daniel R. Roe et al. Journal of Chemical Theory and Computation
- An enantioselective artificial metallo-hydratase
- (2013) Jeffrey Bos et al. Chemical Science
- Enantioselective Artificial Metalloenzymes by Creation of a Novel Active Site at the Protein Dimer Interface
- (2012) Jeffrey Bos et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Flexibility, Diversity, and Cooperativity: Pillars of Enzyme Catalysis
- (2011) Gordon G. Hammes et al. BIOCHEMISTRY
- Slow dynamics in protein fluctuations revealed by time-structure based independent component analysis: The case of domain motions
- (2011) Yusuke Naritomi et al. JOURNAL OF CHEMICAL PHYSICS
- Is an Intuitive Convergence Definition of Molecular Dynamics Simulations Solely Based on the Root Mean Square Deviation Possible?
- (2011) B. Knapp et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- OpenMM: A Hardware-Independent Framework for Molecular Simulations
- (2010) Peter Eastman et al. COMPUTING IN SCIENCE & ENGINEERING
- What can molecular modelling bring to the design of artificial inorganic cofactors?
- (2010) Victor Muñoz Robles et al. FARADAY DISCUSSIONS
- A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu
- (2010) Stefan Grimme et al. JOURNAL OF CHEMICAL PHYSICS
- Catalytic enantioselective syn hydration of enones in water using a DNA-based catalyst
- (2010) Arnold J. Boersma et al. Nature Chemistry
- Computational Design of an Enzyme Catalyst for a Stereoselective Bimolecular Diels-Alder Reaction
- (2010) J. B. Siegel et al. SCIENCE
- A 21st century revisionist's view at a turning point in enzymology
- (2009) Zachary D Nagel et al. Nature Chemical Biology
- Structure of the transcriptional regulator LmrR and its mechanism of multidrug recognition
- (2008) Pramod Kumar Madoori et al. EMBO JOURNAL
- Kemp elimination catalysts by computational enzyme design
- (2008) Daniela Röthlisberger et al. NATURE
- De Novo Computational Design of Retro-Aldol Enzymes
- (2008) L. Jiang et al. SCIENCE
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