High‐quality draft genome sequence of Gaiella occulta isolated from a 150 meter deep mineral water borehole and comparison with the genome sequences of other deep‐branching lineages of the phylum Actinobacteria

A non-canonical mismatch repair pathway in prokaryotes

(2017) A. Castañeda-García et al.   Nature Communications

Metabolism ofmyo-Inositol by Legionella pneumophila Promotes Infection of Amoebae and Macrophages

(2016) Christian Manske et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ampullimonas aquatilis gen. nov., sp. nov. isolated from bottled mineral water

(2016) Luís França et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Parviterribacter kavangonensis gen. nov., sp. nov. and Parviterribacter multiflagellatus sp. nov., novel members of Parviterribacteraceae fam. nov. within the order Solirubrobacterales, and emended descriptions of the classes Thermoleophilia and Rubrobacteria and their orders and families

(2016) Bärbel U. Foesel et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Whole Genome Comparison of Thermus sp. NMX2.A1 Reveals Principal Carbon Metabolism Differences with Closest Relation Thermus scotoductus SA-01

(2016) Walter J. Müller et al.   G3-Genes Genomes Genetics

Enzymatic conversion of carbon dioxide

(2015) Jiafu Shi et al.   CHEMICAL SOCIETY REVIEWS

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

Cavicella subterranea gen. nov., sp. nov., isolated from a deep mineral-water aquifer, and emended description of the species Perlucidibaca piscinae

(2015) Luís França et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Microbial diversity and dynamics of a groundwater and a still bottled natural mineral water

(2014) Luís França et al.   ENVIRONMENTAL MICROBIOLOGY

Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4

(2014) C. Egas et al.   Standards in Genomic Sciences

GET_HOMOLOGUES, a Versatile Software Package for Scalable and Robust Microbial Pangenome Analysis

(2013) Bruno Contreras-Moreira et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Heliimonas saccharivorans gen. nov., sp. nov., a member of the family Chitinophagaceae isolated from a mineral water aquifer, and emended description of Filimonas lacunae

(2013) T. Leandro et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Nevskia aquatilis sp. nov. and Nevskia persephonica sp. nov., isolated from a mineral water aquifer and the emended description of the genus Nevskia

(2012) Tânia Leandro et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

Gaiella occulta gen. nov., sp. nov., a novel representative of a deep branching phylogenetic lineage within the class Actinobacteria and proposal of Gaiellaceae fam. nov. and Gaiellales ord. nov.

(2011) Luciana Albuquerque et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Degradation of alkanes by bacteria

(2009) Fernando Rojo   ENVIRONMENTAL MICROBIOLOGY

A Unique Combination of Genetic Systems for the Synthesis of Trehalose in Rubrobacter xylanophilus: Properties of a Rare Actinobacterial TreT

(2008) A. Nobre et al.   JOURNAL OF BACTERIOLOGY

myo-Inositol Catabolism inBacillus subtilis

(2008) Ken-ichi Yoshida et al.   JOURNAL OF BIOLOGICAL CHEMISTRY