Circadian disruption and divergent microbiota acquisition under extended photoperiod regimens in chicken

Light exposure influences the diurnal oscillation of gut microbiota in mice

(2018) Guangyan Wu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Host and Environmental Factors Affecting the Intestinal Microbiota in Chickens

(2018) Jannigje G. Kers et al.   Frontiers in Microbiology

16S rRNA gene sequencing reveals effects of photoperiod on cecal microbiota of broiler roosters

(2018) Jun Wang et al.   PeerJ

The Role of Circadian Rhythms in Muscular and Osseous Physiology and Their Regulation by Nutrition and Exercise

(2017) Shinya Aoyama et al.   Frontiers in Neuroscience

The features of mucosa-associated microbiota in primary sclerosing cholangitis

(2016) J. Torres et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Lignocellulosic saccharification by a newly isolated bacterium, Ruminiclostridium thermocellum M3 and cellular cellulase activities for high ratio of glucose to cellobiose

(2016) Tao Sheng et al.   Biotechnology for Biofuels

Microbiota Diurnal Rhythmicity Programs Host Transcriptome Oscillations

(2016) Christoph A. Thaiss et al.   CELL

The Circadian Clock Is a Key Driver of Steroid Hormone Production in Drosophila

(2016) Francesca Di Cara et al.   CURRENT BIOLOGY

Brief light exposure at night disrupts the circadian rhythms in eye growth and choroidal thickness in chicks

(2016) Debora L. Nickla et al.   EXPERIMENTAL EYE RESEARCH

A role for circadian clock in metabolic disease

(2016) Ippei Shimizu et al.   HYPERTENSION RESEARCH

The Common Gut Microbe Eubacterium hallii also Contributes to Intestinal Propionate Formation

(2016) Christina Engels et al.   Frontiers in Microbiology

Comparison of fecal and cecal microbiotas reveals qualitative similarities but quantitative differences

(2015) Dragana Stanley et al.   BMC MICROBIOLOGY

Cultivating Healthy Growth and Nutrition through the Gut Microbiota

(2015) Sathish Subramanian et al.   CELL

Time for Food: The Intimate Interplay between Nutrition, Metabolism, and the Circadian Clock

(2015) Gad Asher et al.   CELL

How informative is the mouse for human gut microbiota research?

(2015) T. L. A. Nguyen et al.   Disease Models & Mechanisms

Deciphering chicken gut microbial dynamics based on high-throughput 16S rRNA metagenomics analyses

(2015) Mohd Mohd Shaufi et al.   Gut Pathogens

Lactobacillus-produced exopolysaccharides and their potential health benefits: a review

(2015) D.A. Patten et al.   Beneficial Microbes

Microbiota of the chicken gastrointestinal tract: influence on health, productivity and disease

(2014) Dragana Stanley et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Transkingdom Control of Microbiota Diurnal Oscillations Promotes Metabolic Homeostasis

(2014) Christoph A. Thaiss et al.   CELL

Human Genetics Shape the Gut Microbiome

(2014) Julia K. Goodrich et al.   CELL

Altering the Intestinal Microbiota during a Critical Developmental Window Has Lasting Metabolic Consequences

(2014) Laura M. Cox et al.   CELL

Circadian Clocks and Feeding Time Regulate the Oscillations and Levels of Hepatic Triglycerides

(2014) Yaarit Adamovich et al.   Cell Metabolism

The chicken gastrointestinal microbiome

(2014) Brian B. Oakley et al.   FEMS MICROBIOLOGY LETTERS

Meat consumption: Trends and quality matters

(2014) Maeve Henchion et al.   MEAT SCIENCE

Highly Variable Microbiota Development in the Chicken Gastrointestinal Tract

(2014) Dragana Stanley et al.   PLoS One

Influence of Artifact Removal on Rare Species Recovery in Natural Complex Communities Using High-Throughput Sequencing

(2014) Aibin Zhan et al.   PLoS One

Mistimed sleep disrupts circadian regulation of the human transcriptome

(2014) Simon N. Archer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterizing the avian gut microbiota: membership, driving influences, and potential function

(2014) David W. Waite et al.   Frontiers in Microbiology

Homeostasis in Intestinal Epithelium Is Orchestrated by the Circadian Clock and Microbiota Cues Transduced by TLRs

(2013) Atish Mukherji et al.   CELL

Pineal oscillator functioning in the chicken – Effect of photoperiod and melatonin

(2013) Elzbieta Turkowska et al.   CHRONOBIOLOGY INTERNATIONAL

Avian circadian organization: A chorus of clocks

(2013) Vincent M. Cassone   FRONTIERS IN NEUROENDOCRINOLOGY

The embryonic pineal gland of the chicken as a model for experimental jet lag

(2013) Siri Kommedal et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

The gut microbiota and host innate immunity: Regulators of host metabolism and metabolic diseases in poultry?

(2013) M. H. Kogut   JOURNAL OF APPLIED POULTRY RESEARCH

The microbiome: stress, health and disease

(2013) Rachel D. Moloney et al.   MAMMALIAN GENOME

Bacterial colonization factors control specificity and stability of the gut microbiota

(2013) S. Melanie Lee et al.   NATURE

The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks

(2013) Pelin Yilmaz et al.   NUCLEIC ACIDS RESEARCH

Targeting the Microbiota to Address Diet-Induced Obesity: A Time Dependent Challenge

(2013) Siobhan F. Clarke et al.   PLoS One

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Fecal Microbiota and Metabolome of Children with Autism and Pervasive Developmental Disorder Not Otherwise Specified

(2013) Maria De Angelis et al.   PLoS One

Impact of daylength on behavioural output in commercial broilers

(2012) Karen Schwean-Lardner et al.   APPLIED ANIMAL BEHAVIOUR SCIENCE

Time-Restricted Feeding without Reducing Caloric Intake Prevents Metabolic Diseases in Mice Fed a High-Fat Diet

(2012) Megumi Hatori et al.   Cell Metabolism

Timing to Perfection: The Biology of Central and Peripheral Circadian Clocks

(2012) Urs Albrecht   NEURON

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Adverse Metabolic Consequences in Humans of Prolonged Sleep Restriction Combined with Circadian Disruption

(2012) O. M. Buxton et al.   Science Translational Medicine

The bird of time: cognition and the avian biological clock

(2012) Vincent M. Cassone et al.   Frontiers in Molecular Neuroscience

Effect of light intensity on broiler behaviour and diurnal rhythms

(2011) Aman Deep et al.   APPLIED ANIMAL BEHAVIOUR SCIENCE

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Gastrointestinal Microbiome Signatures of Pediatric Patients With Irritable Bowel Syndrome

(2011) Delphine M. Saulnier et al.   GASTROENTEROLOGY

Immune Response of Chicken Gut to Natural Colonization by Gut Microflora and to Salmonella enterica Serovar Enteritidis Infection

(2011) Magdalena Crhanova et al.   INFECTION AND IMMUNITY

Age-Associated Disruption of Molecular Clock Expression in Skeletal Muscle of the Spontaneously Hypertensive Rat

(2011) Mitsunori Miyazaki et al.   PLoS One

Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

(2011) Patrick D. Schloss et al.   PLoS One

JTK_CYCLE: An Efficient Nonparametric Algorithm for Detecting Rhythmic Components in Genome-Scale Data Sets

(2010) Michael E. Hughes et al.   JOURNAL OF BIOLOGICAL RHYTHMS

Light at night increases body mass by shifting the time of food intake

(2010) L. K. Fonken et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

(2009) Victor Kunin et al.   ENVIRONMENTAL MICROBIOLOGY

Conservative Fragments in Bacterial 16S rRNA Genes and Primer Design for 16S Ribosomal DNA Amplicons in Metagenomic Studies

(2009) Yong Wang et al.   PLoS One

A High-Throughput DNA Sequence Aligner for Microbial Ecology Studies

(2009) Patrick D. Schloss   PLoS One

Duration of Melatonin Regulates Seasonal Changes in Song Control Nuclei of the House Sparrow, Passer domesticus: Independence from Gonads and Circadian Entrainment

(2008) Vincent M. Cassone et al.   JOURNAL OF BIOLOGICAL RHYTHMS