Modulation of miRNA expression in natural populations of A. thaliana along a wide altitudinal gradient of Indian Himalayas

Cold stress modulates osmolytes and antioxidant system in Calendula officinalis

(2018) Nelofer Jan et al.   ACTA PHYSIOLOGIAE PLANTARUM

Plant responses to environmental stresses—from gene to biotechnology

(2017) Mohammad Abass Ahanger et al.   AoB Plants

Elongated Hypocotyl 5-Homolog (HYH) Negatively Regulates Expression of the Ambient Temperature-Responsive MicroRNA Gene MIR169

(2017) Phanu T. Serivichyaswat et al.   Frontiers in Plant Science

Evolutionary and Environmental Forces Sculpting Leaf Development

(2016) Daniel H. Chitwood et al.   CURRENT BIOLOGY

Functional diversity of microRNA variants in plants

(2016) Dong-Hoon Jeong   JOURNAL OF PLANT BIOLOGY

Differential expression of microRNAs and potential targets under drought stress in barley

(2016) Jannatul Ferdous et al.   PLANT CELL AND ENVIRONMENT

Identification and Expression Analyses of miRNAs from Two Contrasting Flower Color Cultivars of Canna by Deep Sequencing

(2016) Sribash Roy et al.   PLoS One

The 1001 Arabidopsis DNA Methylomes: An Important Resource for Studying Natural Genetic, Epigenetic, and Phenotypic Variation

(2016) Zhaobo Lang et al.   TRENDS IN PLANT SCIENCE

High light intensity plays a major role in emergence of population level variation in Arabidopsis thaliana along an altitudinal gradient

(2016) Antariksh Tyagi et al.   Scientific Reports

A Comprehensive Analysis of miRNA/isomiR Expression with Gender Difference

(2016) Li Guo et al.   PLoS One

A cotton miRNA is involved in regulation of plant response to salt stress

(2016) Shuai Gao et al.   Scientific Reports

Identification of novel and salt-responsive miRNAs to explore miRNA-mediated regulatory network of salt stress response in radish (Raphanus sativus L.)

(2015) Xiaochuan Sun et al.   BMC GENOMICS

Plant miRNAs: biogenesis, organization and origins

(2015) Hikmet Budak et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Arsenic responsive microRNAs in vivo and their potential involvement in arsenic-induced oxidative stress

(2015) Xuefeng Ren et al.   TOXICOLOGY AND APPLIED PHARMACOLOGY

Bacterial Infection Drives the Expression Dynamics of microRNAs and Their isomiRs

(2015) Katherine J. Siddle et al.   PLoS Genetics

Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses

(2015) Maria Barciszewska-Pacak et al.   Frontiers in Plant Science

isomiRs: Increasing Evidences of isomiRs Complexity in Plant Stress Functional Biology

(2015) Gaurav Sablok et al.   Frontiers in Plant Science

Comprehensive analysis of small RNA-seq data reveals that combination of miRNA with its isomiRs increase the accuracy of target prediction inArabidopsis thaliana

(2015) Firoz Ahmed et al.   RNA Biology

Identification and characterization of microRNAs related to salt stress in broccoli, using high-throughput sequencing and bioinformatics analysis

(2014) Yunhong Tian et al.   BMC PLANT BIOLOGY

Identification and characterization of cold-responsive microRNAs in tea plant (Camellia sinensis) and their targets using high-throughput sequencing and degradome analysis

(2014) Yue Zhang et al.   BMC PLANT BIOLOGY

A genome-wide screen for non-template nucleotides and isomiR repertoires in miRNAs indicates dynamic and versatile microRNAome

(2014) Li Guo et al.   MOLECULAR BIOLOGY REPORTS

Identification and characterization of microRNAs in oilseed rape (Brassica napus) responsive to infection with the pathogenic fungusVerticillium longisporumusingBrassicaAA (Brassica rapa) and CC (Brassica oleracea) as reference genomes

(2014) Dan Shen et al.   NEW PHYTOLOGIST

Novel MiRNA and PhasiRNA Biogenesis Networks in Soybean Roots from Two Sister Lines That Are Resistant and Susceptible to SCN Race 4

(2014) Miaoyun Xu et al.   PLoS One

Genome-Wide Identification of Different Dormant Medicago sativa L. MicroRNAs in Response to Fall Dormancy

(2014) Wenna Fan et al.   PLoS One

Sample sequencing of vascular plants demonstrates widespread conservation and divergence of microRNAs

(2014) Ricardo A. Chávez Montes et al.   Nature Communications

New MicroRNAs in Drosophila—Birth, Death and Cycles of Adaptive Evolution

(2014) Yang Lyu et al.   PLoS Genetics

PASmiR: a literature-curated database for miRNA molecular regulation in plant response to abiotic stress

(2013) Shihua Zhang et al.   BMC PLANT BIOLOGY

Stress-induced early flowering is mediated by miR169 in Arabidopsis thaliana

(2013) Miao Yun Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Distinct substrate specificities of Arabidopsis DCL3 and DCL4

(2013) Hideaki Nagano et al.   NUCLEIC ACIDS RESEARCH

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

High-throughput deep sequencing shows that microRNAs play important roles in switchgrass responses to drought and salinity stress

(2013) Fuliang Xie et al.   PLANT BIOTECHNOLOGY JOURNAL

Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs

(2013) K. Rogers et al.   PLANT CELL

Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa

(2013) S. Lu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The effects of carbon dioxide and temperature on microRNA expression in Arabidopsis development

(2013) Patrick May et al.   Nature Communications

The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets

(2012) M. B. Stocks et al.   BIOINFORMATICS

Deciphering and Prediction of Transcriptome Dynamics under Fluctuating Field Conditions

(2012) Atsushi J. Nagano et al.   CELL

Genome-wide identification of Brassica napus microRNAs and their targets in response to cadmium

(2012) Zhao Sheng Zhou et al.   JOURNAL OF EXPERIMENTAL BOTANY

Identifying Conserved and Novel MicroRNAs in Developing Seeds of Brassica napus Using Deep Sequencing

(2012) Ana Paula Körbes et al.   PLoS One

Identification of Nitrogen Starvation-Responsive MicroRNAs in Arabidopsis thaliana

(2012) Gang Liang et al.   PLoS One

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants

(2011) Basel Khraiwesh et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Identification and comparative analysis of drought-associated microRNAs in two cowpea genotypes

(2011) Blanca E Barrera-Figueroa et al.   BMC PLANT BIOLOGY

Sensitivity of leaf size and shape to climate: global patterns and paleoclimatic applications

(2011) Daniel J. Peppe et al.   NEW PHYTOLOGIST

Massive Analysis of Rice Small RNAs: Mechanistic Implications of Regulated MicroRNAs and Variants for Differential Target RNA Cleavage

(2011) D.-H. Jeong et al.   PLANT CELL

Natural Variation in Arabidopsis: From Molecular Genetics to Ecological Genomics

(2011) D. Weigel   PLANT PHYSIOLOGY

CliMond: global high-resolution historical and future scenario climate surfaces for bioclimatic modelling

(2011) Darren J. Kriticos et al.   Methods in Ecology and Evolution

MicroRNAs and their isomiRs function cooperatively to target common biological pathways

(2011) Nicole Cloonan et al.   GENOME BIOLOGY

Over-expression of microRNA169 confers enhanced drought tolerance to tomato

(2010) Xiaohui Zhang et al.   BIOTECHNOLOGY LETTERS

Sun, vitamin D, and cardiovascular disease

(2010) Armin Zittermann et al.   JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY

Hypoxia responsive gene expression is mediated by various subsets of transcription factors and miRNAs that are determined by the actual oxygen availability

(2010) Francesco Licausi et al.   NEW PHYTOLOGIST

MicroRNA402 Affects Seed Germination of Arabidopsis thaliana Under Stress Conditions via Targeting DEMETER-LIKE Protein3 mRNA

(2010) J. Y. Kim et al.   PLANT AND CELL PHYSIOLOGY

Members of miR-169 family are induced by high salinity and transiently inhibit the NF-YA transcription factor

(2009) Botao Zhao et al.   BMC MOLECULAR BIOLOGY

Differentially Expressed miRNAs Potentially Involved in the Regulation of Defense Mechanism to Drought Stress in Maize Seedlings

(2009) Liya Wei et al.   INTERNATIONAL JOURNAL OF PLANT SCIENCES

Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis

(2009) Dov Moldovan et al.   JOURNAL OF EXPERIMENTAL BOTANY

UV-B-responsive microRNAs in Populus tremula

(2009) Xiaoyun Jia et al.   JOURNAL OF PLANT PHYSIOLOGY

Differential expression of miRNAs in response to salt stress in maize roots

(2008) Dong Ding et al.   ANNALS OF BOTANY

Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana

(2008) H.-H. Liu et al.   RNA