isomiRs: Increasing Evidences of isomiRs Complexity in Plant Stress Functional Biology

Genome-wide identification of the Phaseolus vulgaris sRNAome using small RNA and degradome sequencing

(2015) Damien Formey et al.   BMC GENOMICS

MicroRNA: a new target for improving plant tolerance to abiotic stress

(2015) Baohong Zhang   JOURNAL OF EXPERIMENTAL BOTANY

sRNAtoolbox: an integrated collection of small RNA research tools

(2015) Antonio Rueda et al.   NUCLEIC ACIDS RESEARCH

Stress responsive miRNAs and isomiRs in cereals

(2015) Hikmet Budak et al.   PLANT SCIENCE

Genetic variants in microRNA genes: impact on microRNA expression, function, and disease

(2015) Sophia Cammaerts et al.   Frontiers in Genetics

Comprehensive analysis of small RNA-seq data reveals that combination of miRNA with its isomiRs increase the accuracy of target prediction inArabidopsis thaliana

(2015) Firoz Ahmed et al.   RNA Biology

5′ isomiR variation is of functional and evolutionary importance

(2014) Geok Chin Tan et al.   NUCLEIC ACIDS RESEARCH

Global microRNA modification in cotton (Gossypium hirsutumL.)

(2014) Fuliang Xie et al.   PLANT BIOTECHNOLOGY JOURNAL

Insight into small RNA abundance and expression in high- and low-temperature stress response using deep sequencing in Arabidopsis

(2014) Vesselin Baev et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

isomiRID: a framework to identify microRNA isoforms

(2013) Luiz Felipe Valter de Oliveira et al.   BIOINFORMATICS

Characterization of phosphorus-regulated miR399 and miR827 and their isomirs in barley under phosphorus-sufficient and phosphorus-deficient conditions

(2013) Michael Hackenberg et al.   BMC PLANT BIOLOGY

isomiRex: Web-based identification of microRNAs, isomiR variations and differential expression using next-generation sequencing datasets

(2013) Gaurav Sablok et al.   FEBS LETTERS

miRspring: a compact standalone research tool for analyzing miRNA-seq data

(2013) David T. Humphreys et al.   NUCLEIC ACIDS RESEARCH

Comprehensive Investigation of MicroRNAs Enhanced by Analysis of Sequence Variants, Expression Patterns, ARGONAUTE Loading, and Target Cleavage

(2013) D.-H. Jeong et al.   PLANT PHYSIOLOGY

Phytoplasma-Responsive microRNAs Modulate Hormonal, Nutritional, and Stress Signalling Pathways in Mexican Lime Trees

(2013) Farveh Ehya et al.   PLoS One

miRSeqNovel: An R based workflow for analyzing miRNA sequencing data

(2012) Kui Qian et al.   MOLECULAR AND CELLULAR PROBES

A genome-wide survey of microRNA truncation and 3′ nucleotide addition events in larch (Larix leptolepis)

(2012) Junhong Zhang et al.   PLANTA

IsomiRs – the overlooked repertoire in the dynamic microRNAome

(2012) Corine T. Neilsen et al.   TRENDS IN GENETICS

A Survey of MicroRNA Length Variants Contributing to miRNome Complexity in Peach (Prunus Persica L.)

(2012) Moreno Colaiacovo et al.   Frontiers in Plant Science

Artificial microRNAs (amiRNAs) engineering – On how microRNA-based silencing methods have affected current plant silencing research

(2011) Gaurav Sablok et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

A non-biased framework for the annotation and classification of the non-miRNA small RNA transcriptome

(2011) Lorena Pantano et al.   BIOINFORMATICS

Post-transcriptional generation of miRNA variants by multiple nucleotidyl transferases contributes to miRNA transcriptome complexity

(2011) S. K. Wyman et al.   GENOME RESEARCH

MicroRNAs and their diverse functions in plants

(2011) Guiling Sun   PLANT MOLECULAR BIOLOGY

Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa

(2008) R. D. Morin et al.   GENOME RESEARCH

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

(2008) R. D. Morin et al.   GENOME RESEARCH