Crystal-Structure-Guided Design of Self-Assembling RNA Nanotriangles

Ligand-responsive RNA mechanical switches

(2015) Mark A Boerneke et al.   RNA Biology

De novo design of an RNA tile that self-assembles into a homo-octameric nanoprism

(2015) Jinwen Yu et al.   Nature Communications

Functional conservation despite structural divergence in ligand-responsive RNA switches

(2014) Mark A. Boerneke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A single-stranded architecture for cotranscriptional folding of RNA nanostructures

(2014) C. Geary et al.   SCIENCE

Structure of a hepatitis C virus RNA domain in complex with a translation inhibitor reveals a binding mode reminiscent of riboswitches

(2012) S. M. Dibrov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multistrand RNA Secondary Structure Prediction and Nanostructure Design Including Pseudoknots

(2011) Eckart Bindewald et al.   ACS Nano

Self-Assembling RNA Nanorings Based on RNAI/II Inverse Kissing Complexes

(2011) Wade W. Grabow et al.   NANO LETTERS

Synthetic RNA–protein complex shaped like an equilateral triangle

(2011) Hirohisa Ohno et al.   Nature Nanotechnology

Self-assembling RNA square

(2011) S. M. Dibrov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A polyhedron made of tRNAs

(2010) Isil Severcan et al.   Nature Chemistry

In vitro assembly of cubic RNA-based scaffolds designed in silico

(2010) Kirill A. Afonin et al.   Nature Nanotechnology

Promoting RNA helical stacking via A-minor junctions

(2010) Cody Geary et al.   NUCLEIC ACIDS RESEARCH

Square-Shaped RNA Particles from Different RNA Folds

(2009) Isil Severcan et al.   NANO LETTERS

Conformational inhibition of the hepatitis C virus internal ribosome entry site RNA

(2009) Jerod Parsons et al.   Nature Chemical Biology

Computational strategies for the automated design of RNA nanoscale structures from building blocks using NanoTiler

(2008) Eckart Bindewald et al.   JOURNAL OF MOLECULAR GRAPHICS & MODELLING