Ubiquitin-dependent chloroplast-associated protein degradation in plants

Mechanistic insights into ER-associated protein degradation

(2018) Xudong Wu et al.   CURRENT OPINION IN CELL BIOLOGY

The Dfm1 Derlin Is Required for ERAD Retrotranslocation of Integral Membrane Proteins

(2018) Sonya Neal et al.   MOLECULAR CELL

The outer membrane Omp85-like protein P39 influences metabolic homeostasis in mature Arabidopsis thaliana

(2018) Y.-C. Hsueh et al.   PLANT BIOLOGY

Essentials of Proteolytic Machineries in Chloroplasts

(2017) Kenji Nishimura et al.   Molecular Plant

Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3

(2017) Stefan Schoebel et al.   NATURE

Chloroplast outer envelope protein P39 in A rabidopsis thaliana belongs to the Omp85 protein family

(2017) Yi-Ching Hsueh et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

A Case for Sec61 Channel Involvement in ERAD

(2017) Karin Römisch   TRENDS IN BIOCHEMICAL SCIENCES

With the Help of MOM: Mitochondrial Contributions to Cellular Quality Control

(2017) Ralf J. Braun et al.   TRENDS IN CELL BIOLOGY

Endoplasmic Reticulum–Associated Degradation and Lipid Homeostasis

(2016) Julian Stevenson et al.   Annual Review of Nutrition

Polypeptide Transport-Associated Domains of the Toc75 Channel Protein Are Located in the Intermembrane Space of Chloroplasts

(2016) Yih-Lin Chen et al.   PLANT PHYSIOLOGY

E3 ubiquitin ligase SP1 regulates peroxisome biogenesis inArabidopsis

(2016) Ronghui Pan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lateral opening in the intact β-barrel assembly machinery captured by cryo-EM

(2016) Matthew G. Iadanza et al.   Nature Communications

Multi-functional roles for the polypeptide transport associated domains of Toc75 in chloroplast protein import

(2016) Yamuna D Paila et al.   eLife

Regulation of Chloroplast Protein Import by the Ubiquitin E3 Ligase SP1 Is Important for Stress Tolerance in Plants

(2015) Qihua Ling et al.   CURRENT BIOLOGY

Biogenesis of beta-barrel proteins in evolutionary context

(2015) Thomas Ulrich et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

The Omp85-type outer membrane protein p36 of Arabidopsis thaliana evolved by recent gene duplication

(2015) Kerstin Nicolaisen et al.   JOURNAL OF PLANT RESEARCH

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

Ubiquitin facilitates a quality-control pathway that removes damaged chloroplasts

(2015) J. D. Woodson et al.   SCIENCE

Ubiquitin-dependent protein degradation at the yeast endoplasmic reticulum and nuclear envelope

(2014) Dimitrios Zattas et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

An Arabidopsis Stomatin-Like Protein Affects Mitochondrial Respiratory Supercomplex Organization

(2014) B. Gehl et al.   PLANT PHYSIOLOGY

Border control: selectivity of chloroplast protein import and regulation at the TOC-complex

(2014) Emilie Demarsy et al.   Frontiers in Plant Science

Endoplasmic reticulum-mediated protein quality control in Arabidopsis

(2014) Yidan Liu et al.   Frontiers in Plant Science

Evolution and targeting of Omp85 homologs in the chloroplast outer envelope membrane

(2014) Philip M. Day et al.   Frontiers in Plant Science

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Biogenesis and homeostasis of chloroplasts and other plastids

(2013) Paul Jarvis et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The chloroplast protein import system: From algae to trees

(2012) Lan-Xin Shi et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

The Apoplastic Oxidative Burst Peroxidase in Arabidopsis Is a Major Component of Pattern-Triggered Immunity

(2012) A. Daudi et al.   PLANT CELL

Chloroplast Biogenesis Is Regulated by Direct Action of the Ubiquitin-Proteasome System

(2012) Q. Ling et al.   SCIENCE

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

Molecular and genetic analyses of Tic20 homologues in Arabidopsis thaliana chloroplasts

(2011) Ali Reza Kasmati et al.   PLANT JOURNAL

OEP80, an essential protein paralogous to the chloroplast protein translocation channel Toc75, exists as a 70-kD protein in the Arabidopsis thaliana chloroplast outer envelope

(2011) Shih-Chi Hsu et al.   PLANT MOLECULAR BIOLOGY

In Vivo Analyses of the Roles of Essential Omp85-Related Proteins in the Chloroplast Outer Envelope Membrane

(2011) Weihua Huang et al.   PLANT PHYSIOLOGY

Protein Transport into Chloroplasts

(2010) Hsou-min Li et al.   Annual Review of Plant Biology

Analysis of theArabidopsisCytosolic Proteome Highlights Subcellular Partitioning of Central Plant Metabolism

(2010) Jun Ito et al.   JOURNAL OF PROTEOME RESEARCH

The AAA-ATPase p97 is essential for outer mitochondrial membrane protein turnover

(2010) Shan Xu et al.   MOLECULAR BIOLOGY OF THE CELL

Use of a SPAD-502 meter to measure leaf chlorophyll concentration in Arabidopsis thaliana

(2010) Qihua Ling et al.   PHOTOSYNTHESIS RESEARCH

Stromal Hsp70 Is Important for Protein Translocation into Pea and Arabidopsis Chloroplasts

(2010) P.-H. Su et al.   PLANT CELL

Nucleotide binding and dimerization at the chloroplast pre-protein import receptor, atToc33, are not essential in vivo but do increase import efficiency

(2010) Henrik Aronsson et al.   PLANT JOURNAL

In VitroAnalysis of Hrd1p-mediated Retrotranslocation of Its Multispanning Membrane Substrate 3-Hydroxy-3-methylglutaryl (HMG)-CoA Reductase

(2009) Renee M. Garza et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The High Light Response in Arabidopsis Involves ABA Signaling between Vascular and Bundle Sheath Cells

(2009) G. Galvez-Valdivieso et al.   PLANT CELL

Pheophytin Pheophorbide Hydrolase (Pheophytinase) Is Involved in Chlorophyll Breakdown during Leaf Senescence in Arabidopsis

(2009) S. Schelbert et al.   PLANT CELL

Tape-Arabidopsis Sandwich - a simpler Arabidopsis protoplast isolation method

(2009) Fu-Hui Wu et al.   Plant Methods

A Role for the TOC Complex in Arabidopsis Root Gravitropism

(2009) J. P. Stanga et al.   PLANT PHYSIOLOGY

Dissecting the ER-Associated Degradation of a Misfolded Polytopic Membrane Protein

(2008) Kunio Nakatsukasa et al.   CELL

A role forSENSITIVE TO FREEZING2in protecting chloroplasts against freeze-induced damage in Arabidopsis

(2008) Nicolas Fourrier et al.   PLANT JOURNAL

A modified Gateway cloning strategy for overexpressing tagged proteins in plants

(2008) Manu J Dubin et al.   Plant Methods

In Planta Analysis of the Cell Cycle-Dependent Localization of AtCDC48A and Its Critical Roles in Cell Division, Expansion, and Differentiation

(2008) S. Park et al.   PLANT PHYSIOLOGY