Biogenesis and structure of a type VI secretion baseplate

Automatic Building of Protein Atomic Models from Cryo-EM Maps

(2018) Guillaume Bouvier et al.   BIOPHYSICAL JOURNAL

Structure–Function Analysis of the C-Terminal Domain of the Type VI Secretion TssB Tail Sheath Subunit

(2018) Badreddine Douzi et al.   JOURNAL OF MOLECULAR BIOLOGY

Antibacterial Weapons: Targeted Destruction in the Microbiota

(2018) Benoit Chassaing et al.   TRENDS IN MICROBIOLOGY

Automated map sharpening by maximization of detail and connectivity

(2018) Thomas C. Terwilliger et al.   Acta Crystallographica Section D-Structural Biology

Real-space refinement in PHENIX for cryo-EM and crystallography

(2018) Pavel V. Afonine et al.   Acta Crystallographica Section D-Structural Biology

MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy

(2017) Shawn Q Zheng et al.   NATURE METHODS

cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination

(2017) Ali Punjani et al.   NATURE METHODS

In situ architecture, function, and evolution of a contractile injection system

(2017) Désirée Böck et al.   SCIENCE

Protein structure determination using metagenome sequence data

(2017) Sergey Ovchinnikov et al.   SCIENCE

Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model

(2017) Sheng Wang et al.   PLoS Computational Biology

T6SS: The bacterial "fight club" in the host gut

(2017) Thibault G. Sana et al.   PLoS Pathogens

Applications of contact predictions to structural biology

(2017) Felix Simkovic et al.   IUCrJ

Type VI secretion TssK baseplate protein exhibits structural similarity with phage receptor-binding proteins and evolved to bind the membrane complex

(2017) Van Son Nguyen et al.   Nature Microbiology

Type VI Secretion System Substrates Are Transferred and Reused among Sister Cells

(2016) Andrea Vettiger et al.   CELL

Structure–Function Analysis of the TssL Cytoplasmic Domain Reveals a New Interaction between the Type VI Secretion Baseplate and Membrane Complexes

(2016) Abdelrahim Zoued et al.   JOURNAL OF MOLECULAR BIOLOGY

Molecular Dissection of the Interface between the Type VI Secretion TssM Cytoplasmic Domain and the TssG Baseplate Component

(2016) Laureen Logger et al.   JOURNAL OF MOLECULAR BIOLOGY

Gctf: Real-time CTF determination and correction

(2016) Kai Zhang   JOURNAL OF STRUCTURAL BIOLOGY

A phospholipase A1 antibacterial Type VI secretion effector interacts directly with the C-terminal domain of the VgrG spike protein for delivery

(2016) Nicolas Flaugnatti et al.   MOLECULAR MICROBIOLOGY

Structure of the T4 baseplate and its function in triggering sheath contraction

(2016) Nicholas M. I. Taylor et al.   NATURE

Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta

(2016) Ray Yu-Ruei Wang et al.   eLife

Protein Secondary Structure Prediction Using Deep Convolutional Neural Fields

(2016) Sheng Wang et al.   Scientific Reports

Molecular weaponry: diverse effectors delivered by the Type VI secretion system

(2015) Juliana Alcoforado Diniz et al.   CELLULAR MICROBIOLOGY

Modification of the CpsA Protein Reveals a Role in Alteration of the Streptococcus agalactiae Cell Envelope

(2015) Hannah M. Rowe et al.   INFECTION AND IMMUNITY

Improved reliability, accuracy and quality in automated NMR structure calculation with ARIA

(2015) Fabien Mareuil et al.   JOURNAL OF BIOMOLECULAR NMR

Biogenesis and structure of a type VI secretion membrane core complex

(2015) Eric Durand et al.   NATURE

EMRinger: side chain–directed model and map validation for 3D cryo-electron microscopy

(2015) Benjamin A Barad et al.   NATURE METHODS

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states

(2015) Peng Ge et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states

(2015) Peng Ge et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The Type VI Secretion TssEFGK-VgrG Phage-Like Baseplate Is Recruited to the TssJLM Membrane Complex via Multiple Contacts and Serves As Assembly Platform for Tail Tube/Sheath Polymerization

(2015) Yannick R. Brunet et al.   PLoS Genetics

Kin cell lysis is a danger signal that activates antibacterial pathways of Pseudomonas aeruginosa

(2015) Michele LeRoux et al.   eLife

Tools for macromolecular model building and refinement into electron cryo-microscopy reconstructions

(2015) Alan Brown et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Biochemical analysis of TssK, a core component of the bacterial Type VI secretion system, reveals distinct oligomeric states of TssK and identifies a TssK–TssFG subcomplex

(2014) Grant English et al.   BIOCHEMICAL JOURNAL

Type VI secretion and bacteriophage tail tubes share a common assembly pathway

(2014) Y. R. Brunet et al.   EMBO REPORTS

Construction of functional fragments of the cytoplasmic loop with the C-terminal region of PomA, a stator component of the Vibrio Na+ driven flagellar motor

(2014) Y. Onoue et al.   JOURNAL OF BIOCHEMISTRY

Type VI secretion system effectors: poisons with a purpose

(2014) Alistair B. Russell et al.   NATURE REVIEWS MICROBIOLOGY

Marine Tubeworm Metamorphosis Induced by Arrays of Bacterial Phage Tail-Like Structures

(2014) N. J. Shikuma et al.   SCIENCE

VgrG, Tae, Tle, and beyond: the versatile arsenal of Type VI secretion effectors

(2014) Eric Durand et al.   TRENDS IN MICROBIOLOGY

Sequence co-evolution gives 3D contacts and structures of protein complexes

(2014) Thomas A Hopf et al.   eLife

Tit-for-Tat: Type VI Secretion System Counterattack during Bacterial Cell-Cell Interactions

(2013) Marek Basler et al.   CELL

Three-dimensional Structure of the Toxin-delivery Particle Antifeeding Prophage ofSerratia entomophila

(2013) J. Bernard Heymann et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

TssK Is a Trimeric Cytoplasmic Protein Interacting with Components of Both Phage-like and Membrane Anchoring Complexes of the Type VI Secretion System

(2013) Abdelrahim Zoued et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Type 6 Secretion System-Mediated Immunity to Type 4 Secretion System-Mediated Gene Transfer

(2013) B. T. Ho et al.   SCIENCE

Imaging Type VI Secretion-Mediated Bacterial Killing

(2013) Yannick R. Brunet et al.   Cell Reports

Promoter Swapping Unveils the Role of the Citrobacter rodentium CTS1 Type VI Secretion System in Interbacterial Competition

(2012) Erwan Gueguen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Crystal Structure of the VgrG1 Actin Cross-linking Domain of theVibrio choleraeType VI Secretion System

(2012) Eric Durand et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

RELION: Implementation of a Bayesian approach to cryo-EM structure determination

(2012) Sjors H.W. Scheres   JOURNAL OF STRUCTURAL BIOLOGY

Type VI secretion requires a dynamic contractile phage tail-like structure

(2012) M. Basler et al.   NATURE

Type VI secretion delivers bacteriolytic effectors to target cells

(2011) Alistair B. Russell et al.   NATURE

Protein 3D Structure Computed from Evolutionary Sequence Variation

(2011) Debora S. Marks et al.   PLoS One

An Epigenetic Switch Involving Overlapping Fur and DNA Methylation Optimizes Expression of a Type VI Secretion Gene Cluster

(2011) Yannick R. Brunet et al.   PLoS Genetics

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

PHENIX: a comprehensive Python-based system for macromolecular structure solution

(2010) Paul D. Adams et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Sequential Assembly of the Wedge of the Baseplate of Phage T4 in the Presence and Absence of Gp11 as Monitored by Analytical Ultracentrifugation

(2010) Moh Lan Yap et al.   MACROMOLECULAR BIOSCIENCE

The SciZ protein anchors the enteroaggregativeEscherichia coliType VI secretion system to the cell wall

(2010) Marie-Stéphanie Aschtgen et al.   MOLECULAR MICROBIOLOGY

Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases

(2010) John Kuszewski et al.   PROTEIN SCIENCE

Morphogenesis of the T4 tail and tail fibers

(2010) Petr G Leiman et al.   Virology Journal

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Translocation of a Vibrio cholerae Type VI Secretion Effector Requires Bacterial Endocytosis by Host Cells

(2009) Amy T. Ma et al.   Cell Host & Microbe

The Baseplate Wedges of Bacteriophage T4 Spontaneously Assemble into Hubless Baseplate-Like Structure In Vitro

(2009) Moh Lan Yap et al.   JOURNAL OF MOLECULAR BIOLOGY

Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin

(2009) P. G. Leiman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Type VI secretion: a beginner's guide

(2008) Lewis EH Bingle et al.   CURRENT OPINION IN MICROBIOLOGY

SciN Is an Outer Membrane Lipoprotein Required for Type VI Secretion in Enteroaggregative Escherichia coli

(2008) M.-S. Aschtgen et al.   JOURNAL OF BACTERIOLOGY

In vitro self-assembly of tailorable nanotubes from a simple protein building block

(2008) E. R. Ballister et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA