Combining Landscape Genomics and Ecological Modelling to Investigate Local Adaptation of Indigenous Ugandan Cattle to East Coast Fever

A review on prevalence, control measure, and tolerance of Tanzania Shorthorn Zebu cattle to East Coast fever in Tanzania

(2017) E. L. K. Laisser et al.   TROPICAL ANIMAL HEALTH AND PRODUCTION

Signatures of Selection for Environmental Adaptation and Zebu × Taurine Hybrid Fitness in East African Shorthorn Zebu

(2017) Hussain Bahbahani et al.   Frontiers in Genetics

Genomic signatures of adaptive introgression from European mouflon into domestic sheep

(2017) Mario Barbato et al.   Scientific Reports

A survey of endogenous retrovirus (ERV) sequences in the vicinity of multiple sclerosis (MS)-associated single nucleotide polymorphisms (SNPs)

(2016) Christine Brütting et al.   MOLECULAR BIOLOGY REPORTS

High performance computation of landscape genomic models including local indicators of spatial association

(2016) S. Stucki et al.   Molecular Ecology Resources

Emergence of multi-acaricide resistant Rhipicephalus ticks and its implication on chemical tick control in Uganda

(2016) Patrick Vudriko et al.   Parasites & Vectors

Genome-wide association study of tick resistance in South African Nguni cattle

(2016) N.O. Mapholi et al.   Ticks and Tick-Borne Diseases

The biology of Theileria parva and control of East Coast fever – Current status and future trends

(2016) Vishvanath Nene et al.   Ticks and Tick-Borne Diseases

The Ensembl gene annotation system

(2016) Bronwen L. Aken et al.   Database-The Journal of Biological Databases and Curation

Population-genetic properties of differentiated copy number variations in cattle

(2016) Lingyang Xu et al.   Scientific Reports

- Invited Review - African Indigenous Cattle: Unique Genetic Resources in a Rapidly Changing World

(2015) Okeyo Mwai et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Role of SRC-like adaptor protein (SLAP) in immune and malignant cell signaling

(2015) Julhash U. Kazi et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Model averaging and muddled multimodel inferences

(2015) Brian S. Cade   ECOLOGY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

The Emerging and Diverse Roles of Src-Like Adaptor Proteins in Health and Disease

(2015) Nikolett Marton et al.   MEDIATORS OF INFLAMMATION

A practical guide to environmental association analysis in landscape genomics

(2015) Christian Rellstab et al.   MOLECULAR ECOLOGY

Evidence of long-term gene flow and selection during domestication from analyses of Eurasian wild and domestic pig genomes

(2015) Laurent A F Frantz et al.   NATURE GENETICS

Polymorphisms within the APOBR gene are highly associated with milk levels of prognostic ketosis biomarkers in dairy cows

(2015) Jens Tetens et al.   PHYSIOLOGICAL GENOMICS

SNeP: a tool to estimate trends in recent effective population size trajectories using genome-wide SNP data

(2015) Mario Barbato et al.   Frontiers in Genetics

Beta Regression inR

(2015) Francisco Cribari-Neto et al.   Journal of Statistical Software

Model selection for ecologists: the worldviews of AIC and BIC

(2014) Ken Aho et al.   ECOLOGY

Evolution and genetic diversity of Theileria

(2014) Thillaiampalam Sivakumar et al.   INFECTION GENETICS AND EVOLUTION

Effect of rate of weight gain of steers during the stocker phase. III. Gene expression of adipose tissues and skeletal muscle in growing–finishing beef cattle1

(2014) P. A. Lancaster et al.   JOURNAL OF ANIMAL SCIENCE

Host resistance in cattle to infestation with the cattle tickRhipicephalus microplus

(2014) N. N. Jonsson et al.   PARASITE IMMUNOLOGY

Geographic distribution of non-clinical Theileria parva infection among indigenous cattle populations in contrasting agro-ecological zones of Uganda: implications for control strategies

(2014) Fredrick Kabi et al.   Parasites & Vectors

Prevalence and spatial distribution of Theileria parva in cattle under crop-livestock farming systems in Tororo District, Eastern Uganda

(2014) Dennis Muhanguzi et al.   Parasites & Vectors

Mapping the Global Distribution of Livestock

(2014) Timothy P. Robinson et al.   PLoS One

The Genetic Architecture of Climatic Adaptation of Tropical Cattle

(2014) Laercio R. Porto-Neto et al.   PLoS One

Worldwide Patterns of Ancestry, Divergence, and Admixture in Domesticated Cattle

(2014) Jared E. Decker et al.   PLoS Genetics

Whole-Genome Sequencing of Theileria parva Strains Provides Insight into Parasite Migration and Diversification in the African Continent

(2013) K. Hayashida et al.   DNA RESEARCH

Ecological genomics of local adaptation

(2013) Outi Savolainen et al.   NATURE REVIEWS GENETICS

A comparison of Maxlike and Maxent for modelling species distributions

(2013) Cory Merow et al.   Methods in Ecology and Evolution

Adaptive Genetic Variation on the Landscape: Methods and Cases

(2012) Sean D. Schoville et al.   Annual Review of Ecology Evolution and Systematics

Spatial Proteomics Sheds Light on the Biology of Nucleolar Chaperones

(2012) Mohamed Kodiha et al.   Current Proteomics

Collinearity: a review of methods to deal with it and a simulation study evaluating their performance

(2012) Carsten F. Dormann et al.   ECOGRAPHY

Explaining elephant (Loxodonta africana) and buffalo (Syncerus caffer) spatial distribution in the Zambezi Valley using maximum entropy modelling

(2012) Farai Matawa et al.   ECOLOGICAL MODELLING

PCAdmix: Principal Components-Based Assignment of Ancestry Along Each Chromosome in Individuals with Admixed Ancestry from Two or More Populations

(2012) Abra Brisbin et al.   HUMAN BIOLOGY

Epidemiology of East Coast fever (Theileria parva infection) in Kenya: past, present and the future

(2012) John Gachohi et al.   Parasites & Vectors

Home on the Range: Factors Explaining Partial Migration of African Buffalo in a Tropical Environment

(2012) Robin Naidoo et al.   PLoS One

Alteration of TEAD1 Expression Levels Confers Apoptotic Resistance through the Transcriptional Up-Regulation of Livin

(2012) André Landin Malt et al.   PLoS One

Impact of the LH surge on granulosa cell transcript levels as markers of oocyte developmental competence in cattle

(2012) Isabelle Gilbert et al.   REPRODUCTION

Likelihood analysis of species occurrence probability from presence-only data for modelling species distributions

(2012) J. Andrew Royle et al.   Methods in Ecology and Evolution

The crucial role of the accessible area in ecological niche modeling and species distribution modeling

(2011) Narayani Barve et al.   ECOLOGICAL MODELLING

Spatial variation of tick abundance and seroconversion rates of indigenous cattle to Anaplasma marginale, Babesia bigemina and Theileria parva infections in Uganda

(2011) J. W. Magona et al.   EXPERIMENTAL AND APPLIED ACAROLOGY

Extent and scale of local adaptation in salmonid fishes: review and meta-analysis

(2011) D J Fraser et al.   HEREDITY

Fine Mapping of a QTL for Fertility on BTA7 and Its Association With a CNV in the Israeli Holsteins

(2011) Giora Glick et al.   G3-Genes Genomes Genetics

The Normalized Difference Vegetation Index (NDVI): unforeseen successes in animal ecology

(2010) N Pettorelli et al.   CLIMATE RESEARCH

Environment and farm factors associated with exposure to Theileria parva infection in cattle under traditional mixed farming system in Mbeere District, Kenya

(2010) John M. Gachohi et al.   TROPICAL ANIMAL HEALTH AND PRODUCTION

Haemoparasite prevalence and Theileria parva strain diversity in Cape buffalo (Syncerus caffer) in Uganda

(2010) C.A.L. Oura et al.   VETERINARY PARASITOLOGY

A Simple Genetic Architecture Underlies Morphological Variation in Dogs

(2010) Adam R. Boyko et al.   PLOS BIOLOGY

TGF-b2 Induction Regulates Invasiveness of Theileria-Transformed Leukocytes and Disease Susceptibility

(2010) Marie Chaussepied et al.   PLoS Pathogens

Inference of locus-specific ancestry in closely related populations

(2009) B. Pasaniuc et al.   BIOINFORMATICS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Complete mitochondrial genomes of Bos taurus and Bos indicus provide new insights into intra-species variation, taxonomy and domestication

(2008) S. Hiendleder et al.   CYTOGENETIC AND GENOME RESEARCH

HABITAT QUALITY AND HETEROGENEITY INFLUENCE DISTRIBUTION AND BEHAVIOR IN AFRICAN BUFFALO (SYNCERUS CAFFER)

(2008) John A. Winnie et al.   ECOLOGY

Evolution of Spliceosomal snRNA Genes in Metazoan Animals

(2008) Manuela Marz et al.   JOURNAL OF MOLECULAR EVOLUTION

Gene expression profiling of single bovine embryos uncovers significant effects of in vitro maturation, fertilization and culture

(2008) Sadie L. Smith et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

Clinical features associated with seroconversion to Anaplasma marginale, Babesia bigemina and Theileria parva infections in African cattle under natural tick challenge

(2008) J.W. Magona et al.   VETERINARY PARASITOLOGY

A Prevalent Variant in PPP1R3A Impairs Glycogen Synthesis and Reduces Muscle Glycogen Content in Humans and Mice

(2008) David B Savage et al.   PLOS MEDICINE

Climate change and the tick-borne disease, Theileriosis (East Coast fever) in sub-Saharan Africa

(2007) J.M. Olwoch et al.   JOURNAL OF ARID ENVIRONMENTS