Evidence of long-term gene flow and selection during domestication from analyses of Eurasian wild and domestic pig genomes

Evolution of Tibetan wild boars

(2015) Laurent A F Frantz et al.   NATURE GENETICS

Adaptation and possible ancient interspecies introgression in pigs identified by whole-genome sequencing

(2015) Huashui Ai et al.   NATURE GENETICS

Recent Selective Sweeps in North American Drosophila melanogaster Show Signatures of Soft Sweeps

(2015) Nandita R. Garud et al.   PLoS Genetics

The Evolution of Animal Domestication

(2014) Greger Larson et al.   Annual Review of Ecology Evolution and Systematics

The zooarchaeological application of quantifying cranial shape differences in wild boar and domestic pigs (Sus scrofa) using 3D geometric morphometrics

(2014) Joseph Owen et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Keeping It Local: Evidence for Positive Selection in Swedish Arabidopsis thaliana

(2014) Christian D. Huber et al.   MOLECULAR BIOLOGY AND EVOLUTION

Untangling the hybrid nature of modern pig genomes: a mosaic derived from biogeographically distinct and highly divergentSus scrofapopulations

(2014) Mirte Bosse et al.   MOLECULAR ECOLOGY

Testing models of speciation from genome sequences: divergence and asymmetric admixture in Island South-East AsianSusspecies during the Plio-Pleistocene climatic fluctuations

(2014) Laurent A. F. Frantz et al.   MOLECULAR ECOLOGY

Twenty-five thousand years of fluctuating selection on leopard complex spotting and congenital night blindness in horses

(2014) Arne Ludwig et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Fast Principal Component Analysis of Large-Scale Genome-Wide Data

(2014) Gad Abraham et al.   PLoS One

Establishing the validity of domestication genes using DNA from ancient chickens

(2014) L. Girdland Flink et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evaluating the roles of directed breeding and gene flow in animal domestication

(2014) F. B. Marshall et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

(2014) M. Carneiro et al.   SCIENCE

Toward a new history and geography of human genes informed by ancient DNA

(2014) Joseph K. Pickrell et al.   TRENDS IN GENETICS

Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression

(2014) Mirte Bosse et al.   Nature Communications

Genome Sequencing Highlights the Dynamic Early History of Dogs

(2014) Adam H. Freedman et al.   PLoS Genetics

Evidence for increased tissue androgen sensitivity in neurturin knockout mice

(2013) Ulla Simanainen et al.   JOURNAL OF ENDOCRINOLOGY

SweeD: Likelihood-Based Detection of Selective Sweeps in Thousands of Genomes

(2013) Pavlos Pavlidis et al.   MOLECULAR BIOLOGY AND EVOLUTION

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(2013) Sonja Wojcik et al.   MOLECULAR MEDICINE

Overexpression of RCAN1 isoform 4 in mouse neurons leads to a moderate behavioral impairment

(2013) Devang L Bhoiwala et al.   NEUROLOGICAL RESEARCH

Altered Social Behaviours in Neurexin 1α Knockout Mice Resemble Core Symptoms in Neurodevelopmental Disorders

(2013) Hannah Mary Grayton et al.   PLoS One

Double deletion of melanocortin 4 receptors and SAPAP3 corrects compulsive behavior and obesity in mice

(2013) P. Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A population genetics view of animal domestication

(2013) Greger Larson et al.   TRENDS IN GENETICS

Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus

(2013) Laurent AF Frantz et al.   GENOME BIOLOGY

Integration of Opposing Semaphorin Guidance Cues in Cortical Axons

(2012) Tina Ruediger et al.   CEREBRAL CORTEX

Eating behaviour in obese patients with melanocortin-4 receptor mutations: a literature review

(2012) M Valette et al.   INTERNATIONAL JOURNAL OF OBESITY

The long and winding road: identifying pig domestication through molar size and shape

(2012) Allowen Evin et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Pig Domestication and Human-Mediated Dispersal in Western Eurasia Revealed through Ancient DNA and Geometric Morphometrics

(2012) Claudio Ottoni et al.   MOLECULAR BIOLOGY AND EVOLUTION

Analyses of pig genomes provide insight into porcine demography and evolution

(2012) Martien A. M. Groenen et al.   NATURE

Chemical Genetic Identification of NDR1/2 Kinase Substrates AAK1 and Rabin8 Uncovers Their Roles in Dendrite Arborization and Spine Development

(2012) Sila K. Ultanir et al.   NEURON

Reconstructing the origin and spread of horse domestication in the Eurasian steppe

(2012) V. Warmuth et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Strong signatures of selection in the domestic pig genome

(2012) C.-J. Rubin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regions of Homozygosity in the Porcine Genome: Consequence of Demography and the Recombination Landscape

(2012) Mirte Bosse et al.   PLoS Genetics

Distinguishing between Selective Sweeps from Standing Variation and from a De Novo Mutation

(2012) Benjamin M. Peter et al.   PLoS Genetics

Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data

(2012) Joseph K. Pickrell et al.   PLoS Genetics

The origins of animal domestication and husbandry: A major change in the history of humanity and the biosphere

(2011) Jean-Denis Vigne   COMPTES RENDUS BIOLOGIES

Variants modulating the expression of a chromosome domain encompassing PLAG1 influence bovine stature

(2011) Latifa Karim et al.   NATURE GENETICS

Behavioral Characterization of a Mouse Model Overexpressing DSCR1/ RCAN1

(2011) Mara Dierssen et al.   PLoS One

ABCtoolbox: a versatile toolkit for approximate Bayesian computations

(2010) Daniel Wegmann et al.   BMC BIOINFORMATICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Early Neolithic pig domestication at Jiahu, Henan Province, China: clues from molar shape analyses using geometric morphometric approaches

(2010) T. Cucchi et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Cross-breed comparisons identified a critical 591-kb region for bovine carcass weight QTL (CW-2) on chromosome 6 and the Ile-442-Met substitution in NCAPG as a positional candidate

(2009) Kouji Setoguchi et al.   BMC GENETICS

Rab35 regulates neurite outgrowth and cell shape

(2009) Julien Chevallier et al.   FEBS LETTERS

Bayesian Computation and Model Selection Without Likelihoods

(2009) C. Leuenberger et al.   GENETICS

Efficient Approximate Bayesian Computation Coupled With Markov Chain Monte Carlo Without Likelihood

(2009) Daniel Wegmann et al.   GENETICS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

From wild animals to domestic pets, an evolutionary view of domestication

(2009) C. A. Driscoll et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transient Neuronal Populations Are Required to Guide Callosal Axons: A Role for Semaphorin 3C

(2009) Mathieu Niquille et al.   PLOS BIOLOGY

Fast and flexible simulation of DNA sequence data

(2008) G. K. Chen et al.   GENOME RESEARCH

Expression of Semaphorin3C in axotomized rodent facial and rubrospinal neurons

(2008) Loren W. Oschipok et al.   NEUROSCIENCE LETTERS

The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals

(2008) S. Naderi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Domestication and early agriculture in the Mediterranean Basin: Origins, diffusion, and impact

(2008) M. A. Zeder   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA