Spatiotemporal variations in microbial diversity across the three domains of life in a tropical thalassohaline lake (Dziani Dzaha, Mayotte Island)

Key Role of Alphaproteobacteria and Cyanobacteria in the Formation of Stromatolites of Lake Dziani Dzaha (Mayotte, Western Indian Ocean)

(2018) Emmanuelle Gérard et al.   Frontiers in Microbiology

Transition boundaries for protistan species turnover in hypersaline waters of different biogeographic regions

(2017) Sabine Filker et al.   ENVIRONMENTAL MICROBIOLOGY

Functional diversity and redundancy across fish gut, sediment and water bacterial communities

(2017) Arthur Escalas et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial Diversity and Cyanobacterial Production in Dziani Dzaha Crater Lake, a Unique Tropical Thalassohaline Environment

(2017) Christophe Leboulanger et al.   PLoS One

Microbial diversity in the hypersaline Lake Meyghan, Iran

(2017) Ali Naghoni et al.   Scientific Reports

Diversity and Dynamics of Active Small Microbial Eukaryotes in the Anoxic Zone of a Freshwater Meromictic Lake (Pavin, France)

(2016) Cécile Lepère et al.   Frontiers in Microbiology

Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines

(2016) Charlotte D. Vavourakis et al.   Frontiers in Microbiology

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Bacterial Diversity in the Soda Saline Crater Lake from Isabel Island, Mexico

(2015) José Félix Aguirre-Garrido et al.   MICROBIAL ECOLOGY

Temporal dynamics of activeArchaeain oxygen-depleted zones of two deep lakes

(2015) Mylène Hugoni et al.   Environmental Microbiology Reports

Anaerobic digestion of the microalga Spirulina at extreme alkaline conditions: biogas production, metagenome, and metatranscriptome

(2015) Vímac Nolla-Ardèvol et al.   Frontiers in Microbiology

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys

(2015) William Walters et al.   mSystems

Morphological and molecular approaches reveal highly stratified protist communities along Baltic Sea pelagic redox gradients

(2014) F Weber et al.   AQUATIC MICROBIAL ECOLOGY

Microbial diversity and biogeochemical cycling in soda lakes

(2014) Dimitry Y. Sorokin et al.   EXTREMOPHILES

Salinity and Bacterial Diversity: To What Extent Does the Concentration of Salt Affect the Bacterial Community in a Saline Soil?

(2014) Loredana Canfora et al.   PLoS One

Swarm: robust and fast clustering method for amplicon-based studies

(2014) Frédéric Mahé et al.   PeerJ

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

Picocystis salinarum (Chlorophyta) in saline lakes and hot springs of East Africa

(2012) Lothar Krienitz et al.   PHYCOLOGIA

Phylogenetic Diversities and Community Structure of Members of the Extremely Halophilic Archaea (Order Halobacteriales) in Multiple Saline Sediment Habitats

(2011) Noha H. Youssef et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Rationale for Control of Anthropogenic Nitrogen and Phosphorus to Reduce Eutrophication of Inland Waters

(2011) William M. Lewis et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Microbial eukaryote life in the new hypersaline deep-sea basin Thetis

(2011) Alexandra Stock et al.   EXTREMOPHILES

Prokaryotic Diversity in Aran-Bidgol Salt Lake, the Largest Hypersaline Playa in Iran

(2011) Ali Makhdoumi-Kakhki et al.   MICROBES AND ENVIRONMENTS

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

(2010) THORSTEN STOECK et al.   MOLECULAR ECOLOGY

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Protistan diversity in suboxic and anoxic waters of the Gotland Deep (Baltic Sea) as revealed by 18S rRNA clone libraries

(2009) A Stock et al.   AQUATIC MICROBIAL ECOLOGY

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Spatial and Temporal Patterns in the Microbial Diversity of a Meromictic Soda Lake in Washington State

(2008) P. A. Dimitriu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

REGIONAL VARIATION IN THE HIERARCHICAL PARTITIONING OF DIVERSITY IN CORAL-DWELLING FISHES

(2008) Jonathan Belmaker et al.   ECOLOGY

Microbial eukaryotes in the hypersaline anoxic L'Atalante deep-sea basin

(2008) Eva Alexander et al.   ENVIRONMENTAL MICROBIOLOGY

Protistan community patterns within the brine and halocline of deep hypersaline anoxic basins in the eastern Mediterranean Sea

(2008) Virginia Edgcomb et al.   EXTREMOPHILES