Evaluation of gastric microbiome and metagenomic function in patients with intestinal metaplasia using 16S rRNA gene sequencing

Mucosal microbiome dysbiosis in gastric carcinogenesis

(2017) Olabisi Oluwabukola Coker et al.   GUT

The expression of Helicobacter pylori tfs plasticity zone cluster is regulated by pH and adherence, and its composition is associated with differential gastric IL-8 secretion

(2017) Bruno Silva et al.   HELICOBACTER

Analysis of Gastric Microbiota by Pyrosequencing: Minor Role of Bacteria Other ThanHelicobacter pyloriin the Gastric Carcinogenesis

(2016) Hyun Jin Jo et al.   HELICOBACTER

Gastric microbiota and predicted gene functions are altered after subtotal gastrectomy in patients with gastric cancer

(2016) Ching-Hung Tseng et al.   Scientific Reports

The gut microbiome in health and in disease

(2015) Andrew B. Shreiner et al.   CURRENT OPINION IN GASTROENTEROLOGY

Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

(2014) Susannah J Salter et al.   BMC BIOLOGY

A comprehensive analysis of Helicobacter pylori plasticity zones reveals that they are integrating conjugative elements with intermediate integration specificity

(2014) Wolfgang Fischer et al.   BMC GENOMICS

Helicobacter pylori CagA and Gastric Cancer: A Paradigm for Hit-and-Run Carcinogenesis

(2014) Masanori Hatakeyama   Cell Host & Microbe

Differences in Gastric Mucosal Microbiota Profiling in Patients with Chronic Gastritis, Intestinal Metaplasia, and Gastric Cancer Using Pyrosequencing Methods

(2014) Chang Soo Eun et al.   HELICOBACTER

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

The Prevalence ofHelicobacter pyloriInfection Decreases with Older Age in Atrophic Gastritis

(2013) Shaohua Chen et al.   Gastroenterology Research and Practice

A bacterial driver–passenger model for colorectal cancer: beyond the usual suspects

(2012) Harold Tjalsma et al.   NATURE REVIEWS MICROBIOLOGY

Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance

(2012) Steven W. Kembel et al.   PLoS Computational Biology

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Networks of Gene Sharing among 329 Proteobacterial Genomes Reveal Differences in Lateral Gene Transfer Frequency at Different Phylogenetic Depths

(2010) T. Kloesges et al.   MOLECULAR BIOLOGY AND EVOLUTION

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Strain-specific genes of Helicobacter pylori: genome evolution driven by a novel type IV secretion system and genomic island transfer

(2010) Wolfgang Fischer et al.   NUCLEIC ACIDS RESEARCH

Evidence of Transfer by Conjugation of Type IV Secretion System Genes between Bartonella Species and Rhizobium radiobacter in Amoeba

(2010) Watcharee Saisongkorh et al.   PLoS One

Lateral genetic transfer: open issues

(2009) M. A. Ragan et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Helicobacter Pylori's Plasticity Zones Are Novel Transposable Elements

(2009) Dangeruta Kersulyte et al.   PLoS One

Role of type IV secretion inHelicobacter pyloripathogenesis

(2008) Steffen Backert et al.   CELLULAR MICROBIOLOGY