Networks of Gene Sharing among 329 Proteobacterial Genomes Reveal Differences in Lateral Gene Transfer Frequency at Different Phylogenetic Depths

Diversity of 16S rRNA Genes within Individual Prokaryotic Genomes

(2010) A. Y. Pei et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genome Networks Root the Tree of Life between Prokaryotic Domains

(2010) Tal Dagan et al.   Genome Biology and Evolution

A global network of coexisting microbes from environmental and whole-genome sequence data

(2010) S. Chaffron et al.   GENOME RESEARCH

Using comparative genome analysis to identify problems in annotated microbial genomes

(2010) M. S. Poptsova et al.   MICROBIOLOGY-SGM

Biased gene transfer mimics patterns created through shared ancestry

(2010) C. P. Andam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

CRISPR/Cas, the Immune System of Bacteria and Archaea

(2010) P. Horvath et al.   SCIENCE

Predation between prokaryotes and the origin of eukaryotes

(2009) Yaacov Davidov et al.   BIOESSAYS

Prokaryotic evolution and the tree of life are two different things

(2009) Eric Bapteste et al.   Biology Direct

The  -proteobacteria: the Darwin finches of the bacterial world

(2009) T. J.G. Ettema et al.   Biology Letters

The Complete Plastid Genome Sequence of the Secondarily Nonphotosynthetic Alga Cryptomonas paramecium: Reduction, Compaction, and Accelerated Evolutionary Rate

(2009) Natalie Donaher et al.   Genome Biology and Evolution

Phylogenomics and protein signatures elucidating the evolutionary relationships among the Gammaproteobacteria

(2009) B. Gao et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

A Machine-Learning Approach Reveals That Alignment Properties Alone Can Accurately Predict Inference of Lateral Gene Transfer from Discordant Phylogenies

(2009) M. Roettger et al.   MOLECULAR BIOLOGY AND EVOLUTION

The integrated microbial genomes system: an expanding comparative analysis resource

(2009) Victor M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

The impact of long-distance horizontal gene transfer on prokaryotic genome size

(2009) O. X. Cordero et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Network analyses structure genetic diversity in independent genetic worlds

(2009) S. Halary et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diversity, ecology, and genomics of the Roseobacter clade: a short overview

(2008) Thorsten Brinkhoff et al.   ARCHIVES OF MICROBIOLOGY

Francisella tularensis: unravelling the secrets of an intracellular pathogen

(2008) P. C. F. Oyston   JOURNAL OF MEDICAL MICROBIOLOGY

Dealing with incongruence in phylogenomic analyses

(2008) N. Galtier et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution

(2008) T. Dagan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome evolution in cyanobacteria: The stable core and the variable shell

(2008) T. Shi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Direct Visualization of Horizontal Gene Transfer

(2008) A. Babic et al.   SCIENCE

CRISPR Interference Limits Horizontal Gene Transfer in Staphylococci by Targeting DNA

(2008) Luciano A. Marraffini et al.   SCIENCE

A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans

(2008) Mircea Podar et al.   GENOME BIOLOGY

Unravelling the genomic mosaic of a ubiquitous genus of marine cyanobacteria

(2008) Alexis Dufresne et al.   GENOME BIOLOGY