标题
Pseudogenes as Functionally Significant Elements of the Genome
作者
关键词
-
出版物
BIOCHEMISTRY-MOSCOW
Volume 83, Issue 11, Pages 1332-1349
出版商
Pleiades Publishing Ltd
发表日期
2018-11-15
DOI
10.1134/s0006297918110044
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Functional Classification and Experimental Dissection of Long Noncoding RNAs
- (2018) Florian Kopp et al. CELL
- Nuclear functions of mammalian MicroRNAs in gene regulation, immunity and cancer
- (2018) Hongyu Liu et al. Molecular Cancer
- Congenital Adrenal Hyperplasia (CAH) due to 21-Hydroxylase Deficiency: A Comprehensive Focus on 233 Pathogenic Variants of CYP21A2 Gene
- (2018) Paola Concolino et al. Molecular Diagnosis & Therapy
- Classifying BRAF alterations in cancer: new rational therapeutic strategies for actionable mutations
- (2018) Matthew Dankner et al. ONCOGENE
- Nuclear Long Noncoding RNAs: Key Regulators of Gene Expression
- (2018) Qinyu Sun et al. TRENDS IN GENETICS
- Natural antisense transcripts in diseases: From modes of action to targeted therapies
- (2018) Elżbieta Wanowska et al. Wiley Interdisciplinary Reviews-RNA
- The competing endogenous RNA network of CYP4Z1 and pseudogene CYP4Z2P exerts an anti-apoptotic function in breast cancer
- (2017) Cheng Li et al. FEBS LETTERS
- LncRNA Structural Characteristics in Epigenetic Regulation
- (2017) Chenguang Wang et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Transposable Elements in Human Cancer: Causes and Consequences of Deregulation
- (2017) Sumadi Anwar et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Gene regulation of mammalian long non-coding RNA
- (2017) Heeyoun Bunch MOLECULAR GENETICS AND GENOMICS
- The Pseudogene DUXAP8 Promotes Non-small-cell Lung Cancer Cell Proliferation and Invasion by Epigenetically Silencing EGR1 and RHOB
- (2017) Ming Sun et al. MOLECULAR THERAPY
- Transcription start site-associated small RNAs in thePTENgene
- (2017) Ji-Long Liu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The molecular dynamics of long noncoding RNA control of transcription in PTEN and its pseudogene
- (2017) Nicholas Lister et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Numtogenesis as a mechanism for development of cancer
- (2017) Keshav K. Singh et al. SEMINARS IN CANCER BIOLOGY
- Protein-Coding Genes’ Retrocopies and Their Functions
- (2017) Magdalena Regina Kubiak et al. Viruses-Basel
- Decreased expression of pseudogene PTENP1 promotes malignant behaviours and is associated with the poor survival of patients with HNSCC
- (2017) Jiannan Liu et al. Scientific Reports
- Neuronal-expressed microRNA-targeted pseudogenes compete with coding genes in the human brain
- (2017) S Barbash et al. Translational Psychiatry
- The GBAP1 pseudogene acts as a ceRNA for the glucocerebrosidase gene GBA by sponging miR-22-3p
- (2017) Letizia Straniero et al. Scientific Reports
- NumtS colonization in mammalian genomes
- (2017) F. M. Calabrese et al. Scientific Reports
- CircRNA-derived pseudogenes
- (2016) Rui Dong et al. CELL RESEARCH
- Comparative genomics of the human, macaque and mouse major histocompatibility complex
- (2016) Takashi Shiina et al. IMMUNOLOGY
- Pseudogenes regulate parental gene expressionviaceRNA network
- (2016) Yang An et al. JOURNAL OF CELLULAR AND MOLECULAR MEDICINE
- Competing endogenous RNA networks of CYP4Z1 and pseudogene CYP4Z2P confer tamoxifen resistance in breast cancer
- (2016) Lufeng Zheng et al. MOLECULAR AND CELLULAR ENDOCRINOLOGY
- Olfactory receptor pseudo-pseudogenes
- (2016) Lucia L. Prieto-Godino et al. NATURE
- Transcription of the non-coding RNA upperhand controls Hand2 expression and heart development
- (2016) Kelly M. Anderson et al. NATURE
- Endogenous microRNA sponges: evidence and controversy
- (2016) Daniel W. Thomson et al. NATURE REVIEWS GENETICS
- A double-strand break can trigger immunoglobulin gene conversion
- (2016) Giulia Bastianello et al. NUCLEIC ACIDS RESEARCH
- Non-coding RNAs as regulators in epigenetics
- (2016) Jian-Wei Wei et al. ONCOLOGY REPORTS
- Molecular Evolution of PTEN Pseudogenes in Mammals
- (2016) Jingsi Tang et al. PLoS One
- One Loop to Rule Them All: The Ping-Pong Cycle and piRNA-Guided Silencing
- (2016) Benjamin Czech et al. TRENDS IN BIOCHEMICAL SCIENCES
- Inhibitory effect of RNA-mediated knockdown of zinc finger protein 91 pseudogene on pancreatic cancer cell growth and invasion
- (2016) Weiyi Huang et al. Oncology Letters
- HMGA1-pseudogenes and cancer
- (2016) Marco De Martino et al. Oncotarget
- PIWI-Interacting RNA: Its Biogenesis and Functions
- (2015) Yuka W. Iwasaki et al. Annual Review of Biochemistry
- Pseudogenes transcribed in breast invasive carcinoma show subtype-specific expression and ceRNA potential
- (2015) Joshua D Welch et al. BMC GENOMICS
- The 3′UTR of the pseudogene CYP4Z2P promotes tumor angiogenesis in breast cancer by acting as a ceRNA for CYP4Z1
- (2015) Lufeng Zheng et al. BREAST CANCER RESEARCH AND TREATMENT
- The role of NANOG transcriptional factor in the development of malignant phenotype of cancer cells
- (2015) Natalia Gawlik-Rzemieniewska et al. CANCER BIOLOGY & THERAPY
- The BRAF Pseudogene Functions as a Competitive Endogenous RNA and Induces Lymphoma In Vivo
- (2015) Florian A. Karreth et al. CELL
- Gene Conversion Between Cationic Trypsinogen (PRSS1 ) and the Pseudogene Trypsinogen 6 (PRSS3P2 ) in Patients with Chronic Pancreatitis
- (2015) Agnieszka Magdalena Rygiel et al. HUMAN MUTATION
- Circulating CUDR, LSINCT-5 and PTENP1 long noncoding RNAs in sera distinguish patients with gastric cancer from healthy controls
- (2015) Lei Dong et al. INTERNATIONAL JOURNAL OF CANCER
- Are Human Translated Pseudogenes Functional?
- (2015) Jinrui Xu et al. MOLECULAR BIOLOGY AND EVOLUTION
- VEGFR-1 Pseudogene Expression and Regulatory Function in Human Colorectal Cancer Cells
- (2015) X. Ye et al. MOLECULAR CANCER RESEARCH
- The landscape of long noncoding RNAs in the human transcriptome
- (2015) Matthew K Iyer et al. NATURE GENETICS
- From guide to target: molecular insights into eukaryotic RNA-interference machinery
- (2015) Jonathan J Ipsaro et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Interaction of long noncoding RNAs and microRNAs in the pathogenesis of idiopathic pulmonary fibrosis
- (2015) Chaoqun Huang et al. PHYSIOLOGICAL GENOMICS
- The small RNA content of human sperm reveals pseudogene-derived piRNAs complementary to protein-coding genes
- (2015) Lorena Pantano et al. RNA
- Pseudogene-expressed RNAs: a new frontier in cancers
- (2015) Xuefei Shi et al. TUMOR BIOLOGY
- Oncocers: ceRNA-mediated cross-talk by sponging miRNAs in oncogenic pathways
- (2015) Sercan Ergun et al. TUMOR BIOLOGY
- Differentially-Expressed Pseudogenes in HIV-1 Infection
- (2015) Aditi Gupta et al. Viruses-Basel
- From guide to target: molecular insights into eukaryotic RNA-interference machinery
- (2015) Jonathan J Ipsaro et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Many lncRNAs, 5’UTRs, and pseudogenes are translated and some are likely to express functional proteins
- (2015) Zhe Ji et al. eLife
- siRNA Versus miRNA as Therapeutics for Gene Silencing
- (2015) Jenny K W Lam et al. Molecular Therapy-Nucleic Acids
- Functions of noncoding sequences in mammalian genomes
- (2015) L. I. Patrushev et al. BIOCHEMISTRY-MOSCOW
- Retrotransposons and pseudogenes regulate mRNAs and lncRNAs via the piRNA pathway in the germline
- (2014) Toshiaki Watanabe et al. GENOME RESEARCH
- Posttranscriptional Regulation of Gene Expression by Piwi Proteins and piRNAs
- (2014) Toshiaki Watanabe et al. MOLECULAR CELL
- A draft map of the human proteome
- (2014) Min-Sik Kim et al. NATURE
- The multilayered complexity of ceRNA crosstalk and competition
- (2014) Yvonne Tay et al. NATURE
- The Pan-Cancer analysis of pseudogene expression reveals biologically and clinically relevant tumour subtypes
- (2014) Leng Han et al. Nature Communications
- Processed pseudogenes acquired somatically during cancer development
- (2014) Susanna L. Cooke et al. Nature Communications
- Ribosome Profiling Reveals Pervasive Translation Outside of Annotated Protein-Coding Genes
- (2014) Nicholas T. Ingolia et al. Cell Reports
- Processed pseudogene insertions in somatic cells
- (2014) Haig H Kazazian Mobile DNA
- Pseudogene OCT4-pg4 functions as a natural micro RNA sponge to regulate OCT4 expression by competing for miR-145 in hepatocellular carcinoma
- (2013) Lei Wang et al. CARCINOGENESIS
- Pseudogenes: Pseudo or Real Functional Elements?
- (2013) Wen Li et al. Journal of Genetics and Genomics
- Gene regulation by antisense transcription
- (2013) Vicent Pelechano et al. NATURE REVIEWS GENETICS
- A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells
- (2013) Per Johnsson et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- A mammalian pseudogene lncRNA at the interface of inflammation and anti-inflammatory therapeutics
- (2013) Nicole A Rapicavoli et al. eLife
- Retrotransposition of gene transcripts leads to structural variation in mammalian genomes
- (2013) Adam D Ewing et al. GENOME BIOLOGY
- Mass Spectrometry–Based Proteomics and Network Biology
- (2012) Ariel Bensimon et al. Annual Review of Biochemistry
- Expressed Pseudogenes in the Transcriptional Landscape of Human Cancers
- (2012) Shanker Kalyana-Sundaram et al. CELL
- Olfactory Receptor Multigene Family in Vertebrates: From the Viewpoint of Evolutionary Genomics
- (2012) Yoshihito Niimura CURRENT GENOMICS
- Human Nanog pseudogene8 promotes the proliferation of gastrointestinal cancer cells
- (2012) Keita Uchino et al. EXPERIMENTAL CELL RESEARCH
- "Orphan" Retrogenes in the Human Genome
- (2012) J. Ciomborowska et al. MOLECULAR BIOLOGY AND EVOLUTION
- Landscape of transcription in human cells
- (2012) Sarah Djebali et al. NATURE
- Pseudogenes: Newly Discovered Players in Human Cancer
- (2012) L. Poliseno Science Signaling
- Role of BMI1, a Stem Cell Factor, in Cancer Recurrence and Chemoresistance: Preclinical and Clinical Evidences
- (2012) Hifzur Rahman Siddique et al. STEM CELLS
- Increased expression of CYP4Z1 promotes tumor angiogenesis and growth in human breast cancer
- (2012) Wei Yu et al. TOXICOLOGY AND APPLIED PHARMACOLOGY
- The GENCODE pseudogene resource
- (2012) Baikang Pei et al. GENOME BIOLOGY
- Identification of Hydroxysteroid (17β) dehydrogenase type 12 (HSD17B12) as a CD8+ T-cell-defined human tumor antigen of human carcinomas
- (2011) Carmen Visus et al. CANCER IMMUNOLOGY IMMUNOTHERAPY
- A ceRNA Hypothesis: The Rosetta Stone of a Hidden RNA Language?
- (2011) Leonardo Salmena et al. CELL
- Polymorphic NumtS trace human population relationships
- (2011) Martin Lang et al. HUMAN GENETICS
- Deletion of PTENP1 Pseudogene in Human Melanoma
- (2011) Laura Poliseno et al. JOURNAL OF INVESTIGATIVE DERMATOLOGY
- Genetic Diversification by Somatic Gene Conversion
- (2011) Kohei Kurosawa et al. Genes
- Expression of OCT4 pseudogenes in human tumours: lessons from glioma and breast carcinoma
- (2010) Shidou Zhao et al. JOURNAL OF PATHOLOGY
- Nuclear mitochondrial pseudogenes
- (2010) A. I. Gaziev et al. MOLECULAR BIOLOGY
- A coding-independent function of gene and pseudogene mRNAs regulates tumour biology
- (2010) Laura Poliseno et al. NATURE
- RNAi Screen Indicates Widespread Biological Function for Human Natural Antisense Transcripts
- (2010) Mohammad Ali Faghihi et al. PLoS One
- Pseudogene-mediated posttranscriptional silencing of HMGA1 can result in insulin resistance and type 2 diabetes
- (2010) Eusebio Chiefari et al. Nature Communications
- Identification of a 17β-hydroxysteroid dehydrogenase type 12 pseudogene as the source of a highly restricted BALB/c Meth A tumor rejection peptide
- (2009) Ronald C. Hendrickson et al. CANCER IMMUNOLOGY IMMUNOTHERAPY
- MicroRNAs: Target Recognition and Regulatory Functions
- (2009) David P. Bartel CELL
- Origins and Mechanisms of miRNAs and siRNAs
- (2009) Richard W. Carthew et al. CELL
- Current Trends in Pseudogene Detection and Characterization
- (2009) Eric Rouchka et al. Current Bioinformatics
- Connexin43 pseudogene in breast cancer cells offers a novel therapeutic target
- (2009) A. Bier et al. MOLECULAR CANCER THERAPEUTICS
- Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes
- (2008) Toshiaki Watanabe et al. NATURE
- Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes
- (2008) Oliver H. Tam et al. NATURE
- RNA-based gene duplication: mechanistic and evolutionary insights
- (2008) Henrik Kaessmann et al. NATURE REVIEWS GENETICS
- Numt-Mediated Double-Strand Break Repair Mitigates Deletions during Primate Genome Evolution
- (2008) Einat Hazkani-Covo et al. PLoS Genetics
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