Genome analysis and -omics approaches provide new insights into the biodegradation potential of Rhodococcus

Genome-based analysis for the identification of genes involved in o-xylene degradation in Rhodococcus opacus R7

(2018) Alessandra Di Canito et al.   BMC GENOMICS

Transcriptomics and Lipidomics of the Environmental Strain Rhodococcus ruber Point out Consumption Pathways and Potential Metabolic Bottlenecks for Polyethylene Degradation

(2017) Kévin Gravouil et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

The effects of model aromatic lignin compounds on growth and lipid accumulation of Rhodococcus rhodochrous

(2017) Sara A. Shields-Menard et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Effects of sulfur-metabolizing bacterial community diversity on H2S emission behavior in landfills with different operation modes

(2016) Yuan Fang et al.   BIODEGRADATION

Microbial diversity and hydrocarbon degrading gene capacity of a crude oil field soil as determined by metagenomics analysis

(2016) Firouz Abbasian et al.   BIOTECHNOLOGY PROGRESS

Biochemical and spectroscopic characterization of purified Latex Clearing Protein (Lcp) from newly isolated rubber degrading Rhodococcus rhodochrous strain RPK1 reveals novel properties of Lcp

(2016) Sirimaporn Watcharakul et al.   BMC MICROBIOLOGY

Comparative transcriptomics elucidates adaptive phenol tolerance and utilization in lipid-accumulatingRhodococcus opacusPD630

(2016) Aki Yoneda et al.   NUCLEIC ACIDS RESEARCH

Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation

(2016) Ashish Pathak et al.   PLoS One

Genome and Proteome Analysis of Rhodococcus erythropolis MI2: Elucidation of the 4,4´-Dithiodibutyric Acid Catabolism

(2016) Heba Khairy et al.   PLoS One

Metabolic responses of Rhodococcus erythropolis PR4 grown on diesel oil and various hydrocarbons

(2015) Krisztián Laczi et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A P450 fusion library of heme domains from Rhodococcus jostii RHA1 and its evaluation for the biotransformation of drug molecules

(2015) Justyna K. Kulig et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Regulation of plasmid-encoded isoprene metabolism inRhodococcus, a representative of an important link in the global isoprene cycle

(2015) Andrew T. Crombie et al.   ENVIRONMENTAL MICROBIOLOGY

Insights from 20 years of bacterial genome sequencing

(2015) Miriam Land et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Complete genome sequence of Streptomyces sp. strain CFMR 7, a natural rubber degrading actinomycete isolated from Penang, Malaysia

(2015) Jayaram Nanthini et al.   JOURNAL OF BIOTECHNOLOGY

Taxonomy, Physiology, and Natural Products of Actinobacteria

(2015) Essaid Ait Barka et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Chemically crosslinked yet reprocessable epoxidized natural rubber via thermo-activated disulfide rearrangements

(2015) L. Imbernon et al.   Polymer Chemistry

Growth of Rhodococcus sp. strain BCP1 on gaseous n-alkanes: new metabolic insights and transcriptional analysis of two soluble di-iron monooxygenase genes

(2015) Martina Cappelletti et al.   Frontiers in Microbiology

Genome and Phenotype Microarray Analyses of Rhodococcus sp. BCP1 and Rhodococcus opacus R7: Genetic Determinants and Metabolic Abilities with Environmental Relevance

(2015) Alessandro Orro et al.   PLoS One

Cytochromes P450 as promising catalysts for biotechnological application: chances and limitations

(2014) Rita Bernhardt et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Induction and carbon catabolite repression of phenol degradation genes in Rhodococcus erythropolis and Rhodococcus jostii

(2014) Juraj Szőköl et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Sequence analysis of 16S rRNA, gyrB and catA genes and DNA-DNA hybridization reveal that Rhodococcus jialingiae is a later synonym of Rhodococcus qingshengii

(2014) A. Tancsics et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Biodegradation of variable-chain-length n-alkanes in Rhodococcus opacus R7 and the involvement of an alkane hydroxylase system in the metabolism

(2014) Jessica Zampolli et al.   AMB Express

Proteomic Analysis of Survival of Rhodococcus jostii RHA1 during Carbon Starvation

(2012) Marianna A. Patrauchan et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The role of the copper-binding enzyme – laccase – in the biodegradation of polyethylene by the actinomycete Rhodococcus ruber

(2012) Miriam Santo et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Biodegradation of phenol using recombinant plasmid-carrying Rhodococcus erythropolis strains

(2012) Ljuba Zídková et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Draft Genome Sequence and Comparative Analysis of the Superb Aromatic-Hydrocarbon Degrader Rhodococcus sp. Strain DK17

(2012) M. Yoo et al.   JOURNAL OF BACTERIOLOGY

Two Transporters Essential for Reassimilation of Novel Cholate Metabolites by Rhodococcus jostii RHA1

(2012) K. Swain et al.   JOURNAL OF BACTERIOLOGY

Chloroform aerobic cometabolism by butane-growing Rhodococcus aetherovorans BCP1 in continuous-flow biofilm reactors

(2011) R. Ciavarelli et al.   BIOPROCESS AND BIOSYSTEMS ENGINEERING

Catechol 1,2-dioxygenase from the new aromatic compounds – Degrading Pseudomonas putida strain N6

(2011) Urszula Guzik et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Genome Sequence of Rhodococcus erythropolis XP, a Biodesulfurizing Bacterium with Industrial Potential

(2011) Fei Tao et al.   JOURNAL OF BACTERIOLOGY

Comparative and Functional Genomics of Rhodococcus opacus PD630 for Biofuels Development

(2011) Jason W. Holder et al.   PLoS Genetics

Analyses of both thealkBGene Transcriptional Start Site andalkBPromoter-Inducing Properties ofRhodococcussp. Strain BCP1 Grown onn-Alkanes

(2010) M. Cappelletti et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification and characterization of genes involved in naphthalene degradation in Rhodococcus opacus R7

(2010) Patrizia Di Gennaro et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Metabolic networks, microbial ecology and ‘omics’ technologies: towards understanding in situ biodegradation processes

(2010) Ramiro Vilchez-Vargas et al.   ENVIRONMENTAL MICROBIOLOGY

Transcriptional Response of Rhodococcus aetherivorans I24 to Polychlorinated Biphenyl-Contaminated Sediments

(2010) Edoardo Puglisi et al.   MICROBIAL ECOLOGY

A comprehensive overview of elements in bioremediation

(2010) Asha A. Juwarkar et al.   REVIEWS IN ENVIRONMENTAL SCIENCE AND BIO-TECHNOLOGY

Effect of electrokinetic remediation on indigenous microbial activity and community within diesel contaminated soil

(2010) Seong-Hye Kim et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Involvement of a Novel ABC Transporter and Monoalkyl Phthalate Ester Hydrolase in Phthalate Ester Catabolism by Rhodococcus jostii RHA1

(2009) H. Hara et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification of different alkane hydroxylase systems inRhodococcus ruberstrain SP2B, an hexane-degrading actinomycete

(2009) A. Amouric et al.   JOURNAL OF APPLIED MICROBIOLOGY

Cytochrome P450 125 (CYP125) catalyses C26-hydroxylation to initiate sterol side-chain degradation inRhodococcus jostiiRHA1

(2009) Kamila Z. Rosłoniec et al.   MOLECULAR MICROBIOLOGY

Global Response to Desiccation Stress in the Soil Actinomycete Rhodococcus jostii RHA1

(2008) J. C. LeBlanc et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biodegradation potential of the genus Rhodococcus

(2008) L MARTINKOVA et al.   ENVIRONMENT INTERNATIONAL

Expression of Rhodococcus opacus alkB genes in anhydrous organic solvents

(2008) Yuka Sameshima et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING