Elucidating the interactions between the human gut microbiota and its host through metabolic modeling
出版年份 2014 全文链接
标题
Elucidating the interactions between the human gut microbiota and its host through metabolic modeling
作者
关键词
-
出版物
Frontiers in Genetics
Volume 5, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2014-04-22
DOI
10.3389/fgene.2014.00086
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Identification of anticancer drugs for hepatocellular carcinoma through personalized genome-scale metabolic modeling
- (2014) R. Agren et al. Molecular Systems Biology
- Genome-scale metabolic modelling of hepatocytes reveals serine deficiency in patients with non-alcoholic fatty liver disease
- (2014) Adil Mardinoglu et al. Nature Communications
- Genome-scale modeling of human metabolism - a systems biology approach
- (2013) Adil Mardinoglu et al. Biotechnology Journal
- Mapping condition-dependent regulation of metabolism in yeast through genome-scale modeling
- (2013) Tobias Österlund et al. BMC Systems Biology
- Assessing the Human Gut Microbiota in Metabolic Diseases
- (2013) F. Karlsson et al. DIABETES
- Predicting the impact of diet and enzymopathies on human small intestinal epithelial cells
- (2013) Swagatika Sahoo et al. HUMAN MOLECULAR GENETICS
- High-fat diet alters gut microbiota physiology in mice
- (2013) Hannelore Daniel et al. ISME Journal
- Analysis of the Human Tissue-specific Expression by Genome-wide Integration of Transcriptomics and Antibody-based Proteomics
- (2013) Linn Fagerberg et al. MOLECULAR & CELLULAR PROTEOMICS
- Integration of clinical data with a genome-scale metabolic model of the human adipocyte
- (2013) A. Mardinoglu et al. Molecular Systems Biology
- Dietary intervention impact on gut microbial gene richness
- (2013) Aurélie Cotillard et al. NATURE
- Diet rapidly and reproducibly alters the human gut microbiome
- (2013) Lawrence A. David et al. NATURE
- Gut metagenome in European women with normal, impaired and diabetic glucose control
- (2013) Fredrik H. Karlsson et al. NATURE
- A community-driven global reconstruction of human metabolism
- (2013) Ines Thiele et al. NATURE BIOTECHNOLOGY
- Metabolic modeling of species interaction in the human microbiome elucidates community-level assembly rules
- (2013) R. Levy et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice
- (2013) V. K. Ridaura et al. SCIENCE
- Understanding the interactions between bacteria in the human gut through metabolic modeling
- (2013) Saeed Shoaie et al. Scientific Reports
- The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for Penicillium chrysogenum
- (2013) Rasmus Agren et al. PLoS Computational Biology
- GEMSiRV: a software platform for GEnome-scale metabolic model simulation, reconstruction and visualization
- (2012) Y.-C. Liao et al. BIOINFORMATICS
- Revolutionizing medicine in the 21st century through systems approaches
- (2012) Leroy Hood et al. Biotechnology Journal
- Genome-scale metabolic reconstructions of Pichia stipitis and Pichia pastoris and in-silico evaluation of their potentials
- (2012) Luis Caspeta et al. BMC Systems Biology
- Gut Microbiota Composition and Activity in Relation to Host Metabolic Phenotype and Disease Risk
- (2012) Elaine Holmes et al. Cell Metabolism
- Catchment-scale reconstruction of glacier mass balance using observations and global climate data: Case study of the Hailuogou catchment, south-eastern Tibetan Plateau
- (2012) Yong Zhang et al. JOURNAL OF HYDROLOGY
- Gut microbiota composition correlates with diet and health in the elderly
- (2012) Marcus J. Claesson et al. NATURE
- A metagenome-wide association study of gut microbiota in type 2 diabetes
- (2012) Junjie Qin et al. NATURE
- Human gut microbiome viewed across age and geography
- (2012) Tanya Yatsunenko et al. NATURE
- The influence of diet on the gut microbiota
- (2012) Karen P. Scott et al. PHARMACOLOGICAL RESEARCH
- In silico method for modelling metabolism and gene product expression at genome scale
- (2012) Joshua A. Lerman et al. Nature Communications
- Symptomatic atherosclerosis is associated with an altered gut metagenome
- (2012) Fredrik H. Karlsson et al. Nature Communications
- Reconstruction of Genome-Scale Active Metabolic Networks for 69 Human Cell Types and 16 Cancer Types Using INIT
- (2012) Rasmus Agren et al. PLoS Computational Biology
- OptCom: A Multi-Level Optimization Framework for the Metabolic Modeling and Analysis of Microbial Communities
- (2012) Ali R. Zomorrodi et al. PLoS Computational Biology
- Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome
- (2012) Sahar Abubucker et al. PLoS Computational Biology
- Ageing of the human metaorganism: the microbial counterpart
- (2011) Elena Biagi et al. AGE
- Functional analysis of colonic bacterial metabolism: relevant to health?
- (2011) Henrike M. Hamer et al. AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY
- Culture-independent methods for studying environmental microorganisms: methods, application, and perspective
- (2011) Can Su et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- A multi-tissue type genome-scale metabolic network for analysis of whole-body systems physiology
- (2011) Aarash Bordbar et al. BMC Systems Biology
- A randomised crossover study investigating the effects of galacto-oligosaccharides on the faecal microbiota in men and women over 50 years of age
- (2011) Gemma E. Walton et al. BRITISH JOURNAL OF NUTRITION
- The Microbial-Mammalian Metabolic Axis: Beyond Simple Metabolism
- (2011) Marc-Emmanuel Dumas Cell Metabolism
- Dietary Guidelines for Americans 2010: Implications for Cardiovascular Disease
- (2011) Michael R. Flock et al. Current Atherosclerosis Reports
- Mucosal Macrophages in Intestinal Homeostasis and Inflammation
- (2011) Allan McI Mowat et al. Journal of Innate Immunity
- Translational and systems medicine
- (2011) J. Nielsen JOURNAL OF INTERNAL MEDICINE
- Systems medicine and metabolic modelling
- (2011) A. Mardinoglu et al. JOURNAL OF INTERNAL MEDICINE
- Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease
- (2011) Zeneng Wang et al. NATURE
- Enterotypes of the human gut microbiome
- (2011) Manimozhiyan Arumugam et al. NATURE
- 13C tracer recovery in human stools after digestion of a fat-rich meal labelled with [1,1,1-13C3]tripalmitin and [1,1,1-13C3]triolein
- (2011) Laure Gabert et al. RAPID COMMUNICATIONS IN MASS SPECTROMETRY
- Predicting a Human Gut Microbiota's Response to Diet in Gnotobiotic Mice
- (2011) J. J. Faith et al. SCIENCE
- Competitive and cooperative metabolic interactions in bacterial communities
- (2011) Shiri Freilich et al. Nature Communications
- Gut microbiome-host interactions in health and disease
- (2011) James M Kinross et al. Genome Medicine
- Use of genome-scale metabolic models for understanding microbial physiology
- (2010) Liming Liu et al. FEBS LETTERS
- Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions
- (2010) Aarash Bordbar et al. Molecular Systems Biology
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- Large-scale in silico modeling of metabolic interactions between cell types in the human brain
- (2010) Nathan E Lewis et al. NATURE BIOTECHNOLOGY
- High-throughput generation, optimization and analysis of genome-scale metabolic models
- (2010) Christopher S Henry et al. NATURE BIOTECHNOLOGY
- Towards a knowledge-based Human Protein Atlas
- (2010) Mathias Uhlen et al. NATURE BIOTECHNOLOGY
- A protocol for generating a high-quality genome-scale metabolic reconstruction
- (2010) Ines Thiele et al. Nature Protocols
- Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
- (2010) C. De Filippo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Comparative effects of very low-carbohydrate, high-fat and high-carbohydrate, low-fat weight-loss diets on bowel habit and faecal short-chain fatty acids and bacterial populations
- (2009) Grant D. Brinkworth et al. BRITISH JOURNAL OF NUTRITION
- Bile acid transporters
- (2009) Paul A. Dawson et al. JOURNAL OF LIPID RESEARCH
- Applications of genome-scale metabolic reconstructions
- (2009) Matthew A Oberhardt et al. Molecular Systems Biology
- Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla
- (2009) M. A. Mahowald et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started