Using optical mapping data for the improvement of vertebrate genome assemblies

Finished sequence and assembly of the DUF1220-rich 1q21 region using a haploid human genome

(2014) Majesta O’Bleness et al.   BMC GENOMICS

Single haplotype assembly of the human genome from a hydatidiform mole

(2014) Karyn Meltz Steinberg et al.   GENOME RESEARCH

High-coverage sequencing and annotated assemblies of the budgerigar genome

(2014) Ganeshkumar Ganapathy et al.   GigaScience

Mapping the Human Reference Genome’s Missing Sequence by Three-Way Admixture in Latino Genomes

(2013) Giulio Genovese et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Improving mammalian genome scaffolding using large insert mate-pair next-generation sequencing

(2013) Sebastiaan van Heesch et al.   BMC GENOMICS

Beyond sequencing: optical mapping of DNA in the age of nanotechnology and nanoscopy

(2013) Michal Levy-Sakin et al.   CURRENT OPINION IN BIOTECHNOLOGY

The zebrafish reference genome sequence and its relationship to the human genome

(2013) Kerstin Howe et al.   NATURE

Using population admixture to help complete maps of the human genome

(2013) Giulio Genovese et al.   NATURE GENETICS

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

(2013) Keith R Bradnam et al.   GigaScience

Multicolor Super-Resolution DNA Imaging for Genetic Analysis

(2012) Murat Baday et al.   NANO LETTERS

Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly

(2012) Ernest T Lam et al.   NATURE BIOTECHNOLOGY

Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus)

(2012) Yang Dong et al.   NATURE BIOTECHNOLOGY

Dynamo maker ready to roll

(2011) Susan Young   NATURE

Optically Mapping Multiple Bacterial Genomes Simultaneously in a Single Run

(2011) Matthew C. Riley et al.   PLoS One

Modernizing Reference Genome Assemblies

(2011) Deanna M. Church et al.   PLOS BIOLOGY

Single molecule linear analysis of DNA in nano-channel labeled with sequence specific fluorescent probes

(2010) S. K. Das et al.   NUCLEIC ACIDS RESEARCH

High-resolution human genome structure by single-molecule analysis

(2010) B. Teague et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lineage-Specific Biology Revealed by a Finished Genome Assembly of the Mouse

(2009) Deanna M. Church et al.   PLOS BIOLOGY

Optical mapping discerns genome wide DNA methylation profiles

(2008) Gene E Ananiev et al.   BMC MOLECULAR BIOLOGY

Mapping and sequencing of structural variation from eight human genomes

(2008) Jeffrey M. Kidd et al.   NATURE