Global genetic diversity of var2csa in Plasmodium falciparum with implications for malaria in pregnancy and vaccine development

A reference genome and methylome for the Plasmodium knowlesi A1-H.1 line

(2018) Ernest Diez Benavente et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Burden, pathology, and costs of malaria in pregnancy: new developments for an old problem

(2018) Stephen J Rogerson et al.   LANCET INFECTIOUS DISEASES

A new method for sequencing the hypervariable Plasmodium falciparum gene var2csa from clinical samples

(2017) Antoine Dara et al.   MALARIA JOURNAL

Analysis of nuclear and organellar genomes of Plasmodium knowlesi in humans reveals ancient population structure and recent recombination among host-specific subpopulations

(2017) Ernest Diez Benavente et al.   PLoS Genetics

Characterization of the Plasmodium falciparum and P. berghei glycerol 3-phosphate acyltransferase involved in FASII fatty acid utilization in the malaria parasite apicoplast

(2016) Melanie J. Shears et al.   CELLULAR MICROBIOLOGY

Indels, structural variation, and recombination drive genomic diversity inPlasmodium falciparum

(2016) Alistair Miles et al.   GENOME RESEARCH

Characterizing the impact of sustained sulfadoxine/pyrimethamine use upon the Plasmodium falciparum population in Malawi

(2016) Matt Ravenhall et al.   MALARIA JOURNAL

estMOI: estimating multiplicity of infection using parasite deep sequencing data

(2014) Samuel A. Assefa et al.   BIOINFORMATICS

AliView: a fast and lightweight alignment viewer and editor for large datasets

(2014) Anders Larsson   BIOINFORMATICS

A barcode of organellar genome polymorphisms identifies the geographic origin of Plasmodium falciparum strains

(2014) Mark D. Preston et al.   Nature Communications

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

A molecular switch in the efficiency of translation reinitiation controls expression ofvar2csa, a gene implicated in pregnancy-associated malaria

(2013) Cristina Bancells et al.   MOLECULAR MICROBIOLOGY

DELLY: structural variant discovery by integrated paired-end and split-read analysis

(2012) T. Rausch et al.   BIOINFORMATICS

High Avidity Antibodies to Full-Length VAR2CSA Correlate with Absence of Placental Malaria

(2012) Yeung Lo Tutterrow et al.   PLoS One

Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data

(2011) Valentina Boeva et al.   BIOINFORMATICS

adegenet 1.3-1: new tools for the analysis of genome-wide SNP data

(2011) Thibaut Jombart et al.   BIOINFORMATICS

Positive Selection of Plasmodium falciparum Parasites With Multiple var2csa-Type PfEMP1 Genes During the Course of Infection in Pregnant Women

(2011) Adam F. Sander et al.   JOURNAL OF INFECTIOUS DISEASES

Full-Length Recombinant Plasmodium falciparum VAR2CSA Binds Specifically to CSPG and Induces Potent Parasite Adhesion-Blocking Antibodies

(2010) Pongsak Khunrae et al.   JOURNAL OF MOLECULAR BIOLOGY

Database resources of the National Center for Biotechnology Information

(2010) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

Full-length extracellular region of the var2CSA variant of PfEMP1 is required for specific, high-affinity binding to CSA

(2010) A. Srivastava et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Multiple var2csa-Type PfEMP1 Genes Located at Different Chromosomal Loci Occur in Many Plasmodium falciparum Isolates

(2009) Adam F. Sander et al.   PLoS One

Simultaneous transcription of duplicated var2csa gene copies in individual Plasmodium falciparum parasites

(2009) Kim JM Brolin et al.   GENOME BIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH