estMOI: estimating multiplicity of infection using parasite deep sequencing data

A Poisson hierarchical modelling approach to detecting copy number variation in sequence coverage data

(2013) Nuno Sepúlveda et al.   BMC GENOMICS

Effective Preparation of Plasmodium vivax Field Isolates for High-Throughput Whole Genome Sequencing

(2013) Sarah Auburn et al.   PLoS One

Comparative population structure of Plasmodium falciparum circumsporozoite protein NANP repeat lengths in Lilongwe, Malawi

(2013) Natalie M. Bowman et al.   Scientific Reports

VarB: a variation browsing and analysis tool for variants derived from next-generation sequencing data

(2012) M. D. Preston et al.   BIOINFORMATICS

Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

(2012) Magnus Manske et al.   NATURE

Estimating the Numbers of Malaria Infections in Blood Samples Using High-Resolution Genotyping Data

(2012) Amanda Ross et al.   PLoS One

Close kinship within multiple-genotype malaria parasite infections

(2012) S. C. Nkhoma et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Population Genomic Scan for Candidate Signatures of Balancing Selection to Guide Antigen Characterization in Malaria Parasites

(2012) Alfred Amambua-Ngwa et al.   PLoS Genetics

Drug-Resistant Genotypes and Multi-Clonality in Plasmodium falciparum Analysed by Direct Genome Sequencing from Peripheral Blood of Malaria Patients

(2011) Timothy Robinson et al.   PLoS One