A whole mitochondria analysis of the Tyrolean Iceman’s leather provides insights into the animal sources of Copper Age clothing

Landscape opening and herding strategies: Carbon isotope analyses of herbivore bone collagen from the Neolithic and Bronze Age lakeshore site of Zurich-Mozartstrasse, Switzerland

(2017) Thomas Doppler et al.   QUATERNARY INTERNATIONAL

The 5300-year-old Helicobacter pylori genome of the Iceman

(2016) F. Maixner et al.   SCIENCE

The genetic prehistory of domesticated cattle from their origin to the spread across Europe

(2015) Amelie Scheu et al.   BMC GENETICS

Whole mitochondrial genomes unveil the impact of domestication on goat matrilineal variability

(2015) Licia Colli et al.   BMC GENOMICS

DomeTree: a canonical toolkit for mitochondrial DNA analyses in domesticated animals

(2015) Min-Sheng Peng et al.   Molecular Ecology Resources

Pros and cons of methylation-based enrichment methods for ancient DNA

(2015) Andaine Seguin-Orlando et al.   Scientific Reports

Mitochondrial Genomes of Giant Deers Suggest their Late Survival in Central Europe

(2015) Alexander Immel et al.   Scientific Reports

ANGSD: Analysis of Next Generation Sequencing Data

(2014) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Evolutionary neutrality of mtDNA introgression: evidence from complete mitogenome analysis in roe deer

(2014) M. Matosiuk et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Paging through history: parchment as a reservoir of ancient DNA for next generation sequencing

(2014) M. D. Teasdale et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Positioning the Red Deer (Cervus elaphus) Hunted by the Tyrolean Iceman into a Mitochondrial DNA Phylogeny

(2014) Cristina Olivieri et al.   PLoS One

Species Identification of Archaeological Skin Objects from Danish Bogs: Comparison between Mass Spectrometry-Based Peptide Sequencing and Microscopy-Based Methods

(2014) Luise Ørsted Brandt et al.   PLoS One

Current perspectives and the future of domestication studies

(2014) G. Larson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal

(2014) Pontus Skoglund et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome flux and stasis in a five millennium transect of European prehistory

(2014) Cristina Gamba et al.   Nature Communications

mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters

(2013) Hákon Jónsson et al.   BIOINFORMATICS

Molecular Phylogeography of the Brown Bear (Ursus arctos) in Northeastern Asia Based on Analyses of Complete Mitochondrial DNA Sequences

(2013) Daisuke Hirata et al.   MOLECULAR BIOLOGY AND EVOLUTION

Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

(2013) Ludovic Orlando et al.   NATURE

A mitochondrial genome sequence of a hominin from Sima de los Huesos

(2013) Matthias Meyer et al.   NATURE

Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans

(2013) Maanasa Raghavan et al.   NATURE

Phylogenetic Relationships of Three Italian Merino-Derived Sheep Breeds Evaluated through a Complete Mitogenome Analysis

(2013) Hovirag Lancioni et al.   PLoS One

A population genetics view of animal domestication

(2013) Greger Larson et al.   TRENDS IN GENETICS

Qualimap: evaluating next-generation sequencing alignment data

(2012) Fernando García-Alcalde et al.   BIOINFORMATICS

Improving ancient DNA read mapping against modern reference genomes

(2012) Mikkel Schubert et al.   BMC GENOMICS

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Genomic Affinities of Two 7,000-Year-Old Iberian Hunter-Gatherers

(2012) Federico Sánchez-Quinto et al.   CURRENT BIOLOGY

Phylogenetic Position of a Copper Age Sheep (Ovis aries) Mitochondrial DNA

(2012) Cristina Olivieri et al.   PLoS One

The half-life of DNA in bone: measuring decay kinetics in 158 dated fossils

(2012) M. E. Allentoft et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry combined with multidimensional scaling, binary hierarchical cluster tree and selected diagnostic masses improves species identification of Neolithic keratin sequences from furs o

(2012) Klaus Hollemeyer et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Origins and Genetic Legacy of Neolithic Farmers and Hunter-Gatherers in Europe

(2012) P. Skoglund et al.   SCIENCE

New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing

(2012) Andreas Keller et al.   Nature Communications

Genome-Wide Analysis of the World's Sheep Breeds Reveals High Levels of Historic Mixture and Strong Recent Selection

(2012) James W. Kijas et al.   PLOS BIOLOGY

Setting the stage – Building and working in an ancient DNA laboratory

(2011) Michael Knapp et al.   ANNALS OF ANATOMY-ANATOMISCHER ANZEIGER

Ancient Hybridization and an Irish Origin for the Modern Polar Bear Matriline

(2011) Ceiridwen J. Edwards et al.   CURRENT BIOLOGY

Ötzi, the Iceman and his Leather Clothes

(2010) Alois G. Püntener et al.   CHIMIA

Haplogroup relationships between domestic and wild sheep resolved using a mitogenome panel

(2010) J R S Meadows et al.   HEREDITY

Microstructural, chemical and isotopic evidence for the origin of late neolithic leather recovered from an ice field in the Swiss Alps

(2010) Jorge E. Spangenberg et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Ancient DNA, a Neolithic legging from the Swiss Alps and the early history of goat

(2010) Angela Schlumbaum et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Comparisons between mitochondrial genomes of domestic goat (Capra hircus) reveal the presence of numts and multiple sequencing errors

(2010) Alexandre Hassanin et al.   Mitochondrial DNA

Genetic history of an archaic hominin group from Denisova Cave in Siberia

(2010) David Reich et al.   NATURE

The Enigmatic Origin of Bovine mtDNA Haplogroup R: Sporadic Interbreeding or an Independent Event of Bos primigenius Domestication in Italy?

(2010) Silvia Bonfiglio et al.   PLoS One

Multiplexed DNA Sequence Capture of Mitochondrial Genomes Using PCR Products

(2010) Tomislav Maricic et al.   PLoS One

A Draft Sequence of the Neandertal Genome

(2010) R. E. Green et al.   SCIENCE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

A rapid column-based ancient DNA extraction method for increased sample throughput

(2009) NADIN ROHLAND et al.   Molecular Ecology Resources

The Multifaceted Origin of Taurine Cattle Reflected by the Mitochondrial Genome

(2009) Alessandro Achilli et al.   PLoS One

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Complete Mitochondrial Genome Sequence of the Tyrolean Iceman

(2008) Luca Ermini et al.   CURRENT BIOLOGY