Heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in Saccharomyces cerevisiae

Simultaneous saccharification and co-fermentation of dry diluted acid pretreated corn stover at high dry matter loading: Overcoming the inhibitors by non-tolerant yeast

(2015) Jia-Qing Zhu et al.   BIORESOURCE TECHNOLOGY

Cloning and characterization of heterologous transporters in Saccharomyces cerevisiae and identification of important amino acids for xylose utilization

(2015) Chengqiang Wang et al.   METABOLIC ENGINEERING

Rapid Evolution of Recombinant Saccharomyces cerevisiae for Xylose Fermentation through Formation of Extra-chromosomal Circular DNA

(2015) Mekonnen M. Demeke et al.   PLoS Genetics

Engineering of an endogenous hexose transporter into a specific D-xylose transporter facilitates glucose-xylose co-consumption in Saccharomyces cerevisiae

(2014) Jeroen G Nijland et al.   Biotechnology for Biofuels

Systematic and evolutionary engineering of a xylose isomerase-based pathway in Saccharomyces cerevisiae for efficient conversion yields

(2014) Sun-Mi Lee et al.   Biotechnology for Biofuels

Deletion of d-ribulose-5-phosphate 3-epimerase (RPE1) induces simultaneous utilization of xylose and glucose in xylose-utilizing Saccharomyces cerevisiae

(2014) Ming-Hua Shen et al.   BIOTECHNOLOGY LETTERS

Comparative metabolic profiling revealed limitations in xylose-fermenting yeast during co-fermentation of glucose and xylose in the presence of inhibitors

(2013) Xin Wang et al.   BIOTECHNOLOGY AND BIOENGINEERING

Enhanced expression of genes involved in initial xylose metabolism and the oxidative pentose phosphate pathway in the improved xylose-utilizing Saccharomyces cerevisiae through evolutionary engineering

(2013) Jian Zha et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Optimization of CDT-1 and XYL1 Expression for Balanced Co-Production of Ethanol and Xylitol from Cellobiose and Xylose by Engineered Saccharomyces cerevisiae

(2013) Jian Zha et al.   PLoS One

Combinatorial Design of a Highly Efficient Xylose-Utilizing Pathway in Saccharomyces cerevisiae for the Production of Cellulosic Biofuels

(2012) Byoungjin Kim et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Directed Evolution of Xylose Isomerase for Improved Xylose Catabolism and Fermentation in the Yeast Saccharomyces cerevisiae

(2012) Sun-Mi Lee et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Mass balance and transformation of corn stover by pretreatment with different dilute organic acids

(2012) Lei Qin et al.   BIORESOURCE TECHNOLOGY

Characterization of non-oxidative transaldolase and transketolase enzymes in the pentose phosphate pathway with regard to xylose utilization by recombinant Saccharomyces cerevisiae

(2012) Akinori Matsushika et al.   ENZYME AND MICROBIAL TECHNOLOGY

Evolutionary engineering of Saccharomyces cerevisiae for efficient aerobic xylose consumption

(2012) Gionata Scalcinati et al.   FEMS YEAST RESEARCH

Isobutanol production fromd-xylose by recombinantSaccharomyces cerevisiae

(2012) Dawid Brat et al.   FEMS YEAST RESEARCH

Xylose isomerase overexpression along with engineering of the pentose phosphate pathway and evolutionary engineering enable rapid xylose utilization and ethanol production by Saccharomyces cerevisiae

(2012) Hang Zhou et al.   METABOLIC ENGINEERING

Altering the coenzyme preference of xylose reductase to favor utilization of NADH enhances ethanol yield from xylose in a metabolically engineered strain of Saccharomyces cerevisiae

(2012) Barbara Petschacher et al.   Microbial Cell Factories

Customized optimization of metabolic pathways by combinatorial transcriptional engineering

(2012) Jing Du et al.   NUCLEIC ACIDS RESEARCH

Founder Effects Persist Despite Adaptive Differentiation: A Field Experiment with Lizards

(2012) J. J. Kolbe et al.   SCIENCE

Balance of XYL1 and XYL2 expression in different yeast chassis for improved xylose fermentation

(2012) Jian Zha et al.   Frontiers in Microbiology

Xylitol does not inhibit xylose fermentation by engineered Saccharomyces cerevisiae expressing xylA as severely as it inhibits xylose isomerase reaction in vitro

(2011) Suk-Jin Ha et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Microbial laboratory evolution in the era of genome-scale science

(2011) T. M. Conrad et al.   Molecular Systems Biology

Enzyme mechanism as a kinetic control element for designing synthetic biofuel pathways

(2011) Brooks B Bond-Watts et al.   Nature Chemical Biology

Unravelling evolutionary strategies of yeast for improving galactose utilization through integrated systems level analysis

(2011) K.-K. Hong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Improved xylose and arabinose utilization by an industrial recombinant Saccharomyces cerevisiae strain using evolutionary engineering

(2010) Rosa Garcia Sanchez et al.   Biotechnology for Biofuels

Metabolome, transcriptome and metabolic flux analysis of arabinose fermentation by engineered Saccharomyces cerevisiae

(2010) H. Wouter Wisselink et al.   METABOLIC ENGINEERING

Isoprenoid Pathway Optimization for Taxol Precursor Overproduction in Escherichia coli

(2010) P. K. Ajikumar et al.   SCIENCE

Functional Expression of a Bacterial Xylose Isomerase in Saccharomyces cerevisiae

(2009) D. Brat et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ethanol production from xylose in engineered Saccharomyces cerevisiae strains: current state and perspectives

(2009) Akinori Matsushika et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Construction of a xylose-fermenting Saccharomyces cerevisiae strain by combined approaches of genetic engineering, chemical mutagenesis and evolutionary adaptation

(2009) Enkai Liu et al.   BIOCHEMICAL ENGINEERING JOURNAL

Process optimization to convert forage and sweet sorghum bagasse to ethanol based on ammonia fiber expansion (AFEX) pretreatment

(2009) Bing-Zhi Li et al.   BIORESOURCE TECHNOLOGY

Xylose reductase from Pichia stipitis with altered coenzyme preference improves ethanolic xylose fermentation by recombinant Saccharomyces cerevisiae

(2009) Oskar Bengtsson et al.   Biotechnology for Biofuels

Transcriptional regulation of nonfermentable carbon utilization in budding yeast

(2009) Bernard Turcotte et al.   FEMS YEAST RESEARCH

Synthetic protein scaffolds provide modular control over metabolic flux

(2009) John E Dueber et al.   NATURE BIOTECHNOLOGY

Proteome analysis of the xylose-fermenting mutant yeast strain TMB 3400

(2009) Kaisa Karhumaa et al.   YEAST

Expression of the Gxf1 transporter from Candida intermedia improves fermentation performance in recombinant xylose-utilizing Saccharomyces cerevisiae

(2008) D. Runquist et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Expression of protein engineered NADP+-dependent xylitol dehydrogenase increases ethanol production from xylose in recombinant Saccharomyces cerevisiae

(2008) Akinori Matsushika et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

HOW REPEATABLE IS ADAPTIVE EVOLUTION? THE ROLE OF GEOGRAPHICAL ORIGIN AND FOUNDER EFFECTS IN LABORATORY ADAPTATION

(2008) Pedro Simões et al.   EVOLUTION

Efficient bioethanol production from xylose by recombinant saccharomyces cerevisiae requires high activity of xylose reductase and moderate xylulokinase activity

(2008) Akinori Matsushika et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Regulation of xylose metabolism in recombinant Saccharomyces cerevisiae

(2008) Laura Salusjärvi et al.   Microbial Cell Factories

Analyzing real-time PCR data by the comparative CT method

(2008) Thomas D Schmittgen et al.   Nature Protocols