The B. subtilis Accessory Helicase PcrA Facilitates DNA Replication through Transcription Units

An underlying mechanism for the increased mutagenesis of lagging-strand genes inBacillus subtilis

(2015) Samuel Million-Weaver et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

UvrD facilitates DNA repair by pulling RNA polymerase backwards

(2014) Vitaly Epshtein et al.   NATURE

The Conserved C-Terminus of the PcrA/UvrD Helicase Interacts Directly with RNA Polymerase

(2013) Emma J. Gwynn et al.   PLoS One

Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins

(2013) L. Teytelman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA Repair and Genome Maintenance in Bacillus subtilis

(2012) J. S. Lenhart et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

PcrA-mediated disruption of RecA nucleoprotein filaments—essential role of the ATPase activity of RecA

(2012) Matt V. Fagerburg et al.   NUCLEIC ACIDS RESEARCH

Linking RNA Polymerase Backtracking to Genome Instability in E. coli

(2011) Dipak Dutta et al.   CELL

The Sporulation Protein SirA Inhibits the Binding of DnaA to the Origin of Replication by Contacting a Patch of Clustered Amino Acids

(2011) L. Rahn-Lee et al.   JOURNAL OF BACTERIOLOGY

Control of the replication initiator DnaA by an anti-cooperativity factor

(2011) Houra Merrikh et al.   MOLECULAR MICROBIOLOGY

Co-directional replication–transcription conflicts lead to replication restart

(2011) Houra Merrikh et al.   NATURE

ChIP on Chip: surprising results are often artifacts

(2010) Torsten Waldminghaus et al.   BMC GENOMICS

PcrA Helicase Dismantles RecA Filaments by Reeling in DNA in Uniform Steps

(2010) Jeehae Park et al.   CELL

Regulation of Horizontal Gene Transfer in Bacillus subtilis by Activation of a Conserved Site-Specific Protease

(2010) B. Bose et al.   JOURNAL OF BACTERIOLOGY

Primosomal Proteins DnaD and DnaB Are Recruited to Chromosomal Regions Bound by DnaA in Bacillus subtilis

(2010) W. K. Smits et al.   JOURNAL OF BACTERIOLOGY

Small subunits of RNA polymerase: localization, levels and implications for core enzyme composition

(2010) G. P. Doherty et al.   MICROBIOLOGY-SGM

RNA polymerase mutations that facilitate replication progression in the rep uvrD recF mutant lacking two accessory replicative helicases

(2010) Zeynep Baharoglu et al.   MOLECULAR MICROBIOLOGY

Direct Restart of a Replication Fork Stalled by a Head-On RNA Polymerase

(2010) R. T. Pomerantz et al.   SCIENCE

Co-Orientation of Replication and Transcription Preserves Genome Integrity

(2010) Anjana Srivatsan et al.   PLoS Genetics

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

The helicases DinG, Rep and UvrD cooperate to promote replication across transcription units in vivo

(2009) Hasna Boubakri et al.   EMBO JOURNAL

Rep Provides a Second Motor at the Replisome to Promote Duplication of Protein-Bound DNA

(2009) Colin P. Guy et al.   MOLECULAR CELL

Autonomous plasmid-like replication of a conjugative transposon

(2009) Catherine A. Lee et al.   MOLECULAR MICROBIOLOGY

Ordered association of helicase loader proteins with theBacillus subtilisorigin of replicationin vivo

(2009) Wiep Klaas Smits et al.   MOLECULAR MICROBIOLOGY

Double-strand breaks associated with repetitive DNA can reshape the genome

(2008) J. L. Argueso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA