Interplay between Constraints, Objectives, and Optimality for Genome-Scale Stoichiometric Models
出版年份 2015 全文链接
标题
Interplay between Constraints, Objectives, and Optimality for Genome-Scale Stoichiometric Models
作者
关键词
Metabolic networks, Genome analysis, Metabolic pathways, Bacterial genomics, Optimization, Escherichia coli, Genomic medicine, Metabolites
出版物
PLoS Computational Biology
Volume 11, Issue 4, Pages e1004166
出版商
Public Library of Science (PLoS)
发表日期
2015-04-08
DOI
10.1371/journal.pcbi.1004166
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A Data Integration and Visualization Resource for the Metabolic Network of Synechocystis sp. PCC 6803
- (2014) T. R. Maarleveld et al. PLANT PHYSIOLOGY
- Basic concepts and principles of stoichiometric modeling of metabolic networks
- (2013) Timo R. Maarleveld et al. Biotechnology Journal
- Flux modules in metabolic networks
- (2013) Arne C. Müller et al. JOURNAL OF MATHEMATICAL BIOLOGY
- Temporal Expression-based Analysis of Metabolism
- (2012) Sara B. Collins et al. PLoS Computational Biology
- Toward systems metabolic engineering in cyanobacteria
- (2012) Juan Nogales et al. Bioengineered
- Genome-Scale Metabolic Modeling Elucidates the Role of Proliferative Adaptation in Causing the Warburg Effect
- (2011) Tomer Shlomi et al. PLoS Computational Biology
- BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions
- (2010) Jan Schellenberger et al. BMC BIOINFORMATICS
- The biomass objective function
- (2010) Adam M Feist et al. CURRENT OPINION IN MICROBIOLOGY
- High-throughput generation, optimization and analysis of genome-scale metabolic models
- (2010) Christopher S Henry et al. NATURE BIOTECHNOLOGY
- What is flux balance analysis?
- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
- A protocol for generating a high-quality genome-scale metabolic reconstruction
- (2010) Ines Thiele et al. Nature Protocols
- Sampling the Solution Space in Genome-Scale Metabolic Networks Reveals Transcriptional Regulation in Key Enzymes
- (2010) Sergio Bordel et al. PLoS Computational Biology
- A note on the complexity of finding and enumerating elementary modes
- (2009) Vicente Acuña et al. BIOSYSTEMS
- The ArcBA Two-Component System of Escherichia coli Is Regulated by the Redox State of both the Ubiquinone and the Menaquinone Pool
- (2009) M. Bekker et al. JOURNAL OF BACTERIOLOGY
- Applications of genome-scale metabolic reconstructions
- (2009) Matthew A Oberhardt et al. Molecular Systems Biology
- Metabolic Network Model of a Human Oral Pathogen
- (2008) V. Mazumdar et al. JOURNAL OF BACTERIOLOGY
- Flux Balance Analysis of Barley Seeds: A Computational Approach to Study Systemic Properties of Central Metabolism
- (2008) E. Grafahrend-Belau et al. PLANT PHYSIOLOGY
- Model-driven analysis of experimentally determined growth phenotypes for 465 yeast gene deletion mutants under 16 different conditions
- (2008) Evan S Snitkin et al. GENOME BIOLOGY
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