4.3 Article

A note on the complexity of finding and enumerating elementary modes

期刊

BIOSYSTEMS
卷 99, 期 3, 页码 210-214

出版社

ELSEVIER SCI LTD
DOI: 10.1016/j.biosystems.2009.11.004

关键词

Metabolic networks; Computational complexity; Elementary modes; Enumeration

资金

  1. ANR MIRI [BLAN08-1 335497]
  2. ANR-BBSRC [ANR-07-BSYS 003 02]
  3. Dutch BSIK-BRICKS
  4. INRIA

向作者/读者索取更多资源

In the context of the study into elementary modes of metabolic networks, we prove two complexity results. Enumerating elementary modes containing a specific reaction is hard in an enumeration complexity sense. The decision problem if there exists an elementary mode containing two specific reactions is NP-complete. The complexity of enumerating all elementary modes remains open. (C) 2009 Elsevier Ireland Ltd. All rights reserved.

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