Protein Topology Determines Cysteine Oxidation Fate: The Case of Sulfenyl Amide Formation among Protein Families
出版年份 2015 全文链接
标题
Protein Topology Determines Cysteine Oxidation Fate: The Case of Sulfenyl Amide Formation among Protein Families
作者
关键词
Cysteine, Amides, Oxidation, Free energy, Protein domains, Protein structure, Crystal structure, Phosphatases
出版物
PLoS Computational Biology
Volume 11, Issue 3, Pages e1004051
出版商
Public Library of Science (PLoS)
发表日期
2015-03-06
DOI
10.1371/journal.pcbi.1004051
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Skylign: a tool for creating informative, interactive logos representing sequence alignments and profile hidden Markov models
- (2014) Travis J Wheeler et al. BMC BIOINFORMATICS
- Mechanism of cysteine oxidation by peroxynitrite: An integrated experimental and theoretical study
- (2013) Ari Zeida et al. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS
- The establishment of early B cell tolerance in humans: lessons from primary immunodeficiency diseases
- (2012) Eric Meffre Annals of the New York Academy of Sciences
- The role of protein tyrosine phosphatases in colorectal cancer
- (2012) Elmer Hoekstra et al. BIOCHIMICA ET BIOPHYSICA ACTA-REVIEWS ON CANCER
- SALIGN: a web server for alignment of multiple protein sequences and structures
- (2012) H. Braberg et al. BIOINFORMATICS
- Protein S-nitrosylation and cancer
- (2012) Zhaoqing Wang CANCER LETTERS
- Molecular Basis of the Mechanism of Thiol Oxidation by Hydrogen Peroxide in Aqueous Solution: Challenging the SN2 Paradigm
- (2012) Ari Zeida et al. CHEMICAL RESEARCH IN TOXICOLOGY
- Regulation of intracellular signalling through cysteine oxidation by reactive oxygen species
- (2012) H. Miki et al. JOURNAL OF BIOCHEMISTRY
- An overview on the genetic of rheumatoid arthritis: A never-ending story
- (2011) Carlo Perricone et al. AUTOIMMUNITY REVIEWS
- Comparing and combining implicit ligand sampling with multiple steered molecular dynamics to study ligand migration processes in heme proteins
- (2011) Flavio Forti et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- Coordination chemistry of copper proteins: How nature handles a toxic cargo for essential function
- (2011) Jeffrey T. Rubino et al. JOURNAL OF INORGANIC BIOCHEMISTRY
- Complete Reaction Mechanism of Indoleamine 2,3-Dioxygenase as Revealed by QM/MM Simulations
- (2011) Luciana Capece et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Mycobacterium tuberculosis protein tyrosine phosphatase (PtpA) excludes host vacuolar-H+-ATPase to inhibit phagosome acidification
- (2011) D. Wong et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Accelerated Profile HMM Searches
- (2011) Sean R. Eddy PLoS Computational Biology
- Hidden Markov model speed heuristic and iterative HMM search procedure
- (2010) L Steven Johnson et al. BMC BIOINFORMATICS
- Protein tyrosine phosphatases as drug targets: strategies and challenges of inhibitor development
- (2010) Alastair J Barr Future Medicinal Chemistry
- Synergistic Allostery, a Sophisticated Regulatory Network for the Control of Aromatic Amino Acid Biosynthesis inMycobacterium tuberculosis
- (2010) Celia J. Webby et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Dynamic Active-Site Protection by theM. tuberculosisProtein Tyrosine Phosphatase PtpB Lid Domain
- (2010) E. Megan Flynn et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Protein Tyrosine Phosphatase 1B Inhibitors: A Molecular Level Legitimate Approach for the Management of Diabetes Mellitus
- (2010) Suresh Thareja et al. MEDICINAL RESEARCH REVIEWS
- Ethnogenetic heterogeneity of rheumatoid arthritis—implications for pathogenesis
- (2010) Yuta Kochi et al. Nature Reviews Rheumatology
- Targeting mycobacterium protein tyrosine phosphatase B for antituberculosis agents
- (2010) B. Zhou et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- PTP1B: a double agent in metabolism and oncogenesis
- (2010) Shu-Chin Yip et al. TRENDS IN BIOCHEMICAL SCIENCES
- Orchestrating Redox Signaling Networks through Regulatory Cysteine Switches
- (2009) Candice E. Paulsen et al. ACS Chemical Biology
- Redox Regulation of SH2-Domain-Containing Protein Tyrosine Phosphatases by Two Backdoor Cysteines
- (2009) Cheng-Yu Chen et al. BIOCHEMISTRY
- Formation of a Stabilized Cysteine Sulfinic Acid Is Critical for the Mitochondrial Function of the Parkinsonism Protein DJ-1
- (2009) Jeff Blackinton et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- How Mitogen-Activated Protein Kinases Recognize and Phosphorylate Their Targets: A QM/MM Study
- (2009) Adrian Gustavo Turjanski et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Oxidation of a single active site suffices for the functional inactivation of the dimeric Bacillus subtilis OhrR repressor in vitro
- (2009) Warawan Eiamphungporn et al. NUCLEIC ACIDS RESEARCH
- The Pfam protein families database
- (2009) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Thiol-Based Redox Switches in Eukaryotic Proteins
- (2008) Nicolas Brandes et al. ANTIOXIDANTS & REDOX SIGNALING
- Dynamical Characterization of the Heme NO Oxygen Binding (HNOX) Domain. Insight into Soluble Guanylate Cyclase Allosteric Transition†
- (2008) Luciana Capece et al. BIOCHEMISTRY
- Facile synthesis and biological evaluation of a cell-permeable probe to detect redox-regulated proteins
- (2008) Young Ho Seo et al. BIOORGANIC & MEDICINAL CHEMISTRY LETTERS
- Mycobacterium tuberculosis Virulence Is Mediated by PtpA Dephosphorylation of Human Vacuolar Protein Sorting 33B
- (2008) Horacio Bach et al. Cell Host & Microbe
- Proteomic analysis of antioxidant strategies of Staphylococcus aureus: Diverse responses to different oxidants
- (2008) Carmen Wolf et al. PROTEOMICS
- The implementation of a fast and accurate QM/MM potential method in Amber
- (2007) Ross C. Walker et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started