De Novo Transcriptomes of Forsythia koreana Using a Novel Assembly Method: Insight into Tissue- and Species-Specific Expression of Lignan Biosynthesis-Related Gene

Global scale transcriptome analysis of Arabidopsis embryogenesis in vitro

(2015) Anushka M Wickramasuriya et al.   BMC GENOMICS

Dirigent Protein-Mediated Lignan and Cyanogenic Glucoside Formation in Flax Seed: Integrated Omics and MALDI Mass Spectrometry Imaging

(2015) Doralyn S. Dalisay et al.   JOURNAL OF NATURAL PRODUCTS

Six enzymes from mayapple that complete the biosynthetic pathway to the etoposide aglycone

(2015) Warren Lau et al.   SCIENCE

Generation of Triple-Transgenic Forsythia Cell Cultures as a Platform for the Efficient, Stable, and Sustainable Production of Lignans

(2015) Jun Murata et al.   PLoS One

De Novo Assembly of Coding Sequences of the Mangrove Palm (Nypa fruticans) Using RNA-Seq and Discovery of Whole-Genome Duplications in the Ancestor of Palms

(2015) Ziwen He et al.   PLoS One

SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads

(2014) Y. Xie et al.   BIOINFORMATICS

Identification and functional characterization of a flax UDP-glycosyltransferase glucosylating secoisolariciresinol (SECO) into secoisolariciresinol monoglucoside (SMG) and diglucoside (SDG)

(2014) Kaushik Ghose et al.   BMC PLANT BIOLOGY

Differential Transcriptome Analysis between Paulownia fortunei and Its Synthesized Autopolyploid

(2014) Xiaoshen Zhang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The Draft Genome of Hop (Humulus lupulus), an Essence for Brewing

(2014) S. Natsume et al.   PLANT AND CELL PHYSIOLOGY

Deep RNA-Seq to Unlock the Gene Bank of Floral Development in Sinapis arvensis

(2014) Jia Liu et al.   PLoS One

De novo transcriptome analysis using 454 pyrosequencing of the Himalayan Mayapple, Podophyllum hexandrum

(2013) Dipto Bhattacharyya et al.   BMC GENOMICS

Recent Advances in the Metabolic Engineering of Lignan Biosynthesis Pathways for the Production of Transgenic Plant-Based Foods and Supplements

(2013) Honoo Satake et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

A novel O-methyltransferase involved in the first methylation step of yatein biosynthesis from matairesinol in Anthriscus sylvestris

(2013) Safendrri Komara Ragamustari et al.   Plant Biotechnology

Next Generation Sequencing in Predicting Gene Function in Podophyllotoxin Biosynthesis

(2012) Joaquim V. Marques et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Molecular and functional characterization of novel furofuran-class lignan glucosyltransferases from Forsythia

(2011) Eiichiro Ono et al.   Plant Biotechnology

Effects of Hydroxy Pentacyclic Triterpene Acids from Forsythia viridissima on Asthmatic Responses to Ovalbumin Challenge in Conscious Guinea Pigs

(2010) Ji Yun Lee et al.   BIOLOGICAL & PHARMACEUTICAL BULLETIN

De novo assembly and analysis of RNA-seq data

(2010) Gordon Robertson et al.   NATURE METHODS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Metabolic Engineering of Lignan Biosynthesis in Forsythia Cell Culture

(2009) H. J. Kim et al.   PLANT AND CELL PHYSIOLOGY

Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing

(2009) M. Yassour et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Lignans from the fruits of Forsythia suspensa

(2008) Xiang-Lan Piao et al.   BIOORGANIC & MEDICINAL CHEMISTRY LETTERS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH