The Genome of the Generalist Plant Pathogen Fusarium avenaceum Is Enriched with Genes Involved in Redox, Signaling and Secondary Metabolism

Aggressive dereplication using UHPLC–DAD–QTOF: screening extracts for up to 3000 fungal secondary metabolites

(2014) Andreas Klitgaard et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Genetic transformation of Fusarium avenaceum by Agrobacterium tumefaciens mediated transformation and the development of a USER-Brick vector construction system

(2014) Lisette Sørensen et al.   BMC MOLECULAR BIOLOGY

Accurate Dereplication of Bioactive Secondary Metabolites from Marine-Derived Fungi by UHPLC-DAD-QTOFMS and a MS/HRMS Library

(2014) Sara Kildgaard et al.   Marine Drugs

Apicidin F: Characterization and Genetic Manipulation of a New Secondary Metabolite Gene Cluster in the Rice Pathogen Fusarium fujikuroi

(2014) Eva-Maria Niehaus et al.   PLoS One

FusariumPathogenomics

(2013) Li-Jun Ma et al.   Annual Review of Microbiology

Evidence for inter-specific recombination among the mitochondrial genomes of Fusarium species in the Gibberella fujikuroi complex

(2013) Gerda Fourie et al.   BMC GENOMICS

Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria

(2013) Kerry O’Donnell et al.   FUNGAL GENETICS AND BIOLOGY

Fusarium avenaceum causes burn spot disease syndrome in noble crayfish (Astacus astacus)

(2013) J. Makkonen et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Characterization of Gibberellin Biosynthetic Gene Cluster from Fusarium proliferatum

(2013) Soon-Ok Rim   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Deciphering the Responses of Root Border-Like Cells of Arabidopsis and Flax to Pathogen-Derived Elicitors

(2013) B. Plancot et al.   PLANT PHYSIOLOGY

FSRD: fungal stress response database

(2013) Z. Karanyi et al.   Database-The Journal of Biological Databases and Curation

Comparative Genome Structure, Secondary Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens

(2013) Bradford J. Condon et al.   PLoS Genetics

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

(2013) Philipp Wiemann et al.   PLoS Pathogens

Influence of Carbohydrates on Secondary Metabolism in Fusarium avenaceum

(2013) Jens Sørensen et al.   Toxins

Biosynthesis of Fusarubins Accounts for Pigmentation of Fusarium fujikuroi Perithecia

(2012) Lena Studt et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus

(2012) Marina Marcet-Houben et al.   BMC GENOMICS

Quick guide to polyketide synthase and nonribosomal synthetase genes in Fusarium

(2012) Frederik T. Hansen et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

The Top 10 fungal pathogens in molecular plant pathology

(2012) RALPH DEAN et al.   MOLECULAR PLANT PATHOLOGY

Molecular phylogeny of the higher and lower taxonomy of the Fusarium genus and differences in the evolutionary histories of multiple genes

(2011) Maiko Watanabe et al.   BMC EVOLUTIONARY BIOLOGY

Characterization ofFusarium avenaceumfrom lupin in central Alberta: genetic diversity, mating type and aggressiveness

(2011) M. D. Holtz et al.   CANADIAN JOURNAL OF PLANT PATHOLOGY

The Role of MAPK Signal Transduction Pathways in the Response to Oxidative Stress in the Fungal Pathogen Candida albicans: Implications in Virulence

(2011) Carmen Herrero de Dios et al.   CURRENT PROTEIN & PEPTIDE SCIENCE

Structure and evolution of the Fusarium mating type locus: New insights from the Gibberella fujikuroi complex

(2011) Simon H. Martin et al.   FUNGAL GENETICS AND BIOLOGY

Comparative analysis of Fusarium mitochondrial genomes reveals a highly variable region that encodes an exceptionally large open reading frame

(2011) Rasha M. Al-Reedy et al.   FUNGAL GENETICS AND BIOLOGY

Multilocus Phylogenetics Show High Intraspecific Variability within Fusarium avenaceum

(2011) Tomasz Kulik et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Dereplication of Microbial Natural Products by LC-DAD-TOFMS

(2011) Kristian F. Nielsen et al.   JOURNAL OF NATURAL PRODUCTS

The Transcriptome of Fusarium graminearum During the Infection of Wheat

(2011) Erik Lysøe et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

Genome sequence of the insect pathogenic fungus Cordyceps militaris, a valued traditional chinese medicine

(2011) Peng Zheng et al.   GENOME BIOLOGY

Comparative analysis of fungal protein kinases and associated domains

(2010) Idit Kosti et al.   BMC GENOMICS

Mycotoxin production of selected Fusarium species at different culture conditions

(2010) Meri Kokkonen et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Functional characterization and manipulation of the apicidin biosynthetic pathway inFusarium semitectum

(2010) Jian-Ming Jin et al.   MOLECULAR MICROBIOLOGY

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

(2010) Li-Jun Ma et al.   NATURE

CDD: a Conserved Domain Database for the functional annotation of proteins

(2010) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Indole-Diterpene Biosynthetic Capability of Epichloe Endophytes as Predicted by ltm Gene Analysis

(2009) C. A. Young et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

ABACAS: algorithm-based automatic contiguation of assembled sequences

(2009) S. Assefa et al.   BIOINFORMATICS

Analysis ofFusarium avenaceumMetabolites Produced during Wet Apple Core Rot

(2009) Jens Laurids Sørensen et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Diversity, regulation, and evolution of the gibberellin biosynthetic pathway in fungi compared to plants and bacteria

(2009) Christiane Bömke et al.   PHYTOCHEMISTRY

Multilocus Phylogenetic Diversity of Fusarium avenaceum Pathogenic on Lisianthus

(2009) F. A. Nalim et al.   PHYTOPATHOLOGY

The Tree versus the Forest: The Fungal Tree of Life and the Topological Diversity within the Yeast Phylome

(2009) Marina Marcet-Houben et al.   PLoS One

Fungal LysM effectors: extinguishers of host immunity?

(2009) Ronnie de Jonge et al.   TRENDS IN MICROBIOLOGY

The Genome of Nectria haematococca: Contribution of Supernumerary Chromosomes to Gene Expansion

(2009) Jeffrey J. Coleman et al.   PLoS Genetics

Isolation and Characterization of the Gibberellin Biosynthetic Gene Cluster in Sphaceloma manihoticola

(2008) C. Bomke et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

FTFD: an informatics pipeline supporting phylogenomic analysis of fungal transcription factors

(2008) J. Park et al.   BIOINFORMATICS

Using native and syntenically mapped cDNA alignments to improve de novo gene finding

(2008) Mario Stanke et al.   BIOINFORMATICS

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION