Comparative Genome Structure, Secondary Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens

Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

(2012) Robin A. Ohm et al.   PLoS Pathogens

ChLae1 and ChVel1 Regulate T-toxin Production, Virulence, Oxidative Stress Response, and Development of the Maize Pathogen Cochliobolus heterostrophus

(2012) Dongliang Wu et al.   PLoS Pathogens

Biosynthesis and function of gliotoxin in Aspergillus fumigatus

(2011) Daniel H. Scharf et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A highly conserved NB-LRR encoding gene cluster effective against Setosphaeria turcica in sorghum

(2011) Tom Martin et al.   BMC PLANT BIOLOGY

Identification of Cryptic Products of the Gliotoxin Gene Cluster Using NMR-Based Comparative Metabolomics and a Model for Gliotoxin Biosynthesis

(2011) Ry R. Forseth et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Sfp-type 4′-phosphopantetheinyl transferase is required for lysine synthesis, tolerance to oxidative stress and virulence in the plant pathogenic fungus Cochliobolus sativus

(2011) YUEQIANG LENG et al.   MOLECULAR PLANT PATHOLOGY

The Genome Portal of the Department of Energy Joint Genome Institute

(2011) I. V. Grigoriev et al.   NUCLEIC ACIDS RESEARCH

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations

(2011) Thierry Rouxel et al.   Nature Communications

Rediscovery by Whole Genome Sequencing: Classical Mutations and Genome Polymorphisms in Neurospora crassa

(2011) Kevin McCluskey et al.   G3-Genes Genomes Genetics

Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis

(2011) Stephen B. Goodwin et al.   PLoS Genetics

A novel mode of chromosomal evolution peculiar to filamentous Ascomycete fungi

(2011) James K Hane et al.   GENOME BIOLOGY

Studying Plant-Pathogen Interactions in the Genomics Era: Beyond Molecular Koch's Postulates to Systems Biology

(2010) David J. Schneider et al.   Annual Review of Phytopathology

Phylogenomics reveals subfamilies of fungal nonribosomal peptide synthetases and their evolutionary relationships

(2010) Kathryn E Bushley et al.   BMC EVOLUTIONARY BIOLOGY

Resistance loci affecting distinct stages of fungal pathogenesis: use of introgression lines for QTL mapping and characterization in the maize - Setosphaeria turcica pathosystem

(2010) Chia-Lin Chung et al.   BMC PLANT BIOLOGY

New developments in pathogenicity and virulence of necrotrophs

(2010) Richard P Oliver et al.   CURRENT OPINION IN PLANT BIOLOGY

Functional characterization and manipulation of the apicidin biosynthetic pathway inFusarium semitectum

(2010) Jian-Ming Jin et al.   MOLECULAR MICROBIOLOGY

RNA-mediated gene silencing in the cereal fungal pathogen Cochliobolus sativus

(2010) YUEQIANG LENG et al.   MOLECULAR PLANT PATHOLOGY

Six New Genes Required for Production of T-Toxin, a Polyketide Determinant of High Virulence ofCochliobolus heterostrophusto Maize

(2010) Patrik Inderbitzin et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Host-selective toxins, Ptr ToxA and Ptr ToxB, as necrotrophic effectors in the Pyrenophora tritici-repentis-wheat interaction

(2010) Lynda M. Ciuffetti et al.   NEW PHYTOLOGIST

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

(2010) S. Gnerre et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A unique wheat disease resistance-like gene governs effector-triggered susceptibility to necrotrophic pathogens

(2010) J. D. Faris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Melanin is an essential component for the integrity of the cell wall of Aspergillus fumigatus conidia

(2009) Marc Pihet et al.   BMC MICROBIOLOGY

Horizontal Chromosome Transfer, a Mechanism for the Evolution and Differentiation of a Plant-Pathogenic Fungus

(2009) Yasunori Akagi et al.   EUKARYOTIC CELL

Module evolution and substrate specificity of fungal nonribosomal peptide synthetases involved in siderophore biosynthesis

(2008) Kathryn E Bushley et al.   BMC EVOLUTIONARY BIOLOGY

Host-specific toxins: effectors of necrotrophic pathogenicity

(2008) Timothy L. Friesen et al.   CELLULAR MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

A guardian of grasses: Specific origin and conservation of a unique disease-resistance gene in the grass lineage

(2008) A. Sindhu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY

Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi

(2008) Nora Khaldi et al.   GENOME BIOLOGY

PERMANENT GENETIC RESOURCES: Development of microsatellite markers for the guava rust fungus, Puccinia psidii

(2007) SHAOBIN ZHONG et al.   Molecular Ecology Resources

Characterization of Natural and Induced Variation in theLOV1Gene, a CC-NB-LRR Gene Conferring Victorin Sensitivity and Disease Susceptibility inArabidopsis

(2007) Teresa A. Sweat et al.   MOLECULAR PLANT-MICROBE INTERACTIONS