Characterization of Egg Laying Hen and Broiler Fecal Microbiota in Poultry Farms in Croatia, Czech Republic, Hungary and Slovenia

Extensive Microbial and Functional Diversity within the Chicken Cecal Microbiome

(2014) Martin J. Sergeant et al.   PLoS One

Characterization of Microbiota Composition and Presence of Selected Antibiotic Resistance Genes in Carriage Water of Ornamental Fish

(2014) Lenka Gerzova et al.   PLoS One

Chicken faecal microbiota and disturbances induced by single or repeated therapy with tetracycline and streptomycin

(2013) Petra Videnska et al.   BMC Veterinary Research

Influence of Salmonella enterica serovar Enteritidis infection on the composition of chicken cecal microbiota

(2013) Petra Videnska et al.   BMC Veterinary Research

Abundance and persistence of antibiotic resistance genes in livestock farms: A comprehensive investigation in eastern China

(2013) Weixiao Cheng et al.   ENVIRONMENT INTERNATIONAL

Metabolic niche of a prominent sulfate-reducing human gut bacterium

(2013) F. E. Rey et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Abrupt Temporal Fluctuations in the Chicken Fecal Microbiota Are Explained by Its Gastrointestinal Origin

(2012) M. Sekelja et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Changes in the caecal microflora of chickens following Clostridium perfringens challenge to induce necrotic enteritis

(2012) Dragana Stanley et al.   VETERINARY MICROBIOLOGY

Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance

(2012) Steven W. Kembel et al.   PLoS Computational Biology

Increased Levels of Multiresistant Bacteria and Resistance Genes after Wastewater Treatment and Their Dissemination into Lake Geneva, Switzerland

(2012) Nadine Czekalski et al.   Frontiers in Microbiology

The influence of the cage system and colonisation of Salmonella Enteritidis on the microbial gut flora of laying hens studied by T-RFLP and 454 pyrosequencing

(2011) Steen Nordentoft et al.   BMC MICROBIOLOGY

Sulfatases and a RadicalS-Adenosyl-l-methionine (AdoMet) Enzyme Are Key for Mucosal Foraging and Fitness of the Prominent Human Gut Symbiont,Bacteroides thetaiotaomicron

(2011) Alhosna Benjdia et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Real-time PCR methods for quantitative monitoring of streptomycin and tetracycline resistance genes in agricultural ecosystems

(2011) F. Walsh et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Microarray based comparative genotyping of gentamicin resistant Escherichia coli strains from food animals and humans

(2011) Ama Szmolka et al.   VETERINARY MICROBIOLOGY

Interrelations between the Microbiotas in the Litter and in the Intestines of Commercial Broiler Chickens

(2010) M. D. Cressman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome

(2010) Carlos W Nossa   WORLD JOURNAL OF GASTROENTEROLOGY

Visualization of ribosomal RNA operon copy number distribution

(2009) Rajat Rastogi et al.   BMC MICROBIOLOGY

The Key Role of Segmented Filamentous Bacteria in the Coordinated Maturation of Gut Helper T Cell Responses

(2009) Valérie Gaboriau-Routhiau et al.   IMMUNITY

Reciprocal Interactions between Commensal Bacteria and    Intraepithelial Lymphocytes during Mucosal Injury

(2009) A. S. Ismail et al.   JOURNAL OF IMMUNOLOGY

Metagenomic analyses reveal antibiotic-induced temporal and spatial changes in intestinal microbiota with associated alterations in immune cell homeostasis

(2009) D A Hill et al.   Mucosal Immunology

Evaluation of the bacterial diversity in cecal contents of laying hens fed various molting diets by using bacterial tag-encoded FLX amplicon pyrosequencing

(2009) T. R. Callaway et al.   POULTRY SCIENCE

Comparative Metagenomics Reveals Host Specific Metavirulomes and Horizontal Gene Transfer Elements in the Chicken Cecum Microbiome

(2008) Ani Qu et al.   PLoS One