Characterization of the Miiuy Croaker (Miichthys miiuy) Transcriptome and Development of Immune-Relevant Genes and Molecular Markers

Transcriptome analysis of Sacha Inchi (Plukenetia volubilis L.) seeds at two developmental stages

(2012) Xiaojuan Wang et al.   BMC GENOMICS

De novo sequence assembly and characterisation of a partial transcriptome for an evolutionarily distinct reptile, the tuatara (Sphenodon punctatus)

(2012) Hilary C Miller et al.   BMC GENOMICS

De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)

(2012) Dejun Li et al.   BMC GENOMICS

An unexpected loss of domains in the conservative evolution ninth complement component in a higher teleost, Miichthys miiuy

(2012) Fanxing Meng et al.   FISH & SHELLFISH IMMUNOLOGY

Miiuy Croaker Hepcidin Gene and Comparative Analyses Reveal Evidence for Positive Selection

(2012) Tianjun Xu et al.   PLoS One

Molecular cloning, characterization, and expression analysis of a disease-resistance related CC chemokine gene in miiuy croaker (Miichthys miiuy)

(2011) Tian-jun Xu et al.   AQUACULTURE

De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)

(2011) Zhangying Wang et al.   BMC GENOMICS

Transcriptome characterization and polymorphism detection between subspecies of big sagebrush (Artemisia tridentata)

(2011) Prabin Bajgain et al.   BMC GENOMICS

Genotype-specific responses in Atlantic salmon (Salmo salar) subject to dietary fish oil replacement by vegetable oil: a liver transcriptomic analysis

(2011) Sofia Morais et al.   BMC GENOMICS

Molecular characterization of miiuy croaker CC chemokine gene and its expression following Vibrio anguillarum injection

(2011) Yuan-zhi Cheng et al.   FISH & SHELLFISH IMMUNOLOGY

Molecular cloning, characterization and expression analysis of a miiuy croaker (Miichthys miiuy) CXC chemokine gene resembling the CXCL9/CXCL10/CXCL11

(2011) Yuan-zhi Cheng et al.   FISH & SHELLFISH IMMUNOLOGY

Molecular cloning and comprehensive characterization of cathepsin D in the Miiuy croaker Miichthys miiuy

(2011) Xuezhu Liu et al.   FISH & SHELLFISH IMMUNOLOGY

Sequence and expression analysis of cathepsin S gene in the miiuy croaker Miichthys miiuy

(2011) Yue-na Sun et al.   FISH PHYSIOLOGY AND BIOCHEMISTRY

Development of 30 Novel Polymorphic Expressed Sequence Tags (EST)-Derived Microsatellite Markers for the Miiuy Croaker, Miichthys miiuy

(2011) Tianjun Xu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Transcriptomics of the Bed Bug (Cimex lectularius)

(2011) Xiaodong Bai et al.   PLoS One

Transcriptome Sequencing and De Novo Analysis for Yesso Scallop (Patinopecten yessoensis) Using 454 GS FLX

(2011) Rui Hou et al.   PLoS One

Characterization of the Major Histocompatibility Complex Class II Genes in Miiuy Croaker

(2011) Tianjun Xu et al.   PLoS One

Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches

(2010) Mohamed Salem et al.   BMC GENOMICS

Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery

(2010) Thomas L Parchman et al.   BMC GENOMICS

Deep sequencing-based transcriptome profiling analysis of bacteria-challenged Lateolabrax japonicus reveals insight into the immune-relevant genes in marine fish

(2010) Li-xin Xiang et al.   BMC GENOMICS

Identification and analysis of immune-related transcriptome in Asian seabass Lates calcarifer

(2010) Jun Xia et al.   BMC GENOMICS

Genomic sequences comparison and differential expression of miiuy croaker MHC class I gene, after infection by Vibrio anguillarum

(2010) Tian-jun Xu et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Identification of immune genes of the miiuy croaker (Miichthys miiuy) by sequencing and bioinformatic analysis of ESTs

(2010) Tian-jun Xu et al.   FISH & SHELLFISH IMMUNOLOGY

Technical Note Polymorphic microsatellite loci from two enriched genomic libraries for the genetic analysis of the miiuy croaker, Miichthys miiuy (Sciaenidae)

(2010) R.X. Wang et al.   GENETICS AND MOLECULAR RESEARCH

Integrative analysis of the melanoma transcriptome

(2010) M. F. Berger et al.   GENOME RESEARCH

Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing

(2010) Bin Wang et al.   NUCLEIC ACIDS RESEARCH

Characterization of the horseweed (Conyza canadensis) transcriptome using GS-FLX 454 pyrosequencing and its application for expression analysis of candidate non-target herbicide resistance genes

(2010) Yanhui Peng et al.   PEST MANAGEMENT SCIENCE

Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

(2009) Eli Meyer et al.   BMC GENOMICS

SNP detection for massively parallel whole-genome resequencing

(2009) R. Li et al.   GENOME RESEARCH

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH

CD154-CD40 Interactions Are Essential for Thymus-Dependent Antibody Production in Zebrafish: Insights into the Origin of Costimulatory Pathway in Helper T Cell-Regulated Adaptive Immunity in Early Vertebrates

(2009) Y.-F. Gong et al.   JOURNAL OF IMMUNOLOGY

The DC-SIGN of Zebrafish: Insights into the Existence of a CD209 Homologue in a Lower Vertebrate and Its Involvement in Adaptive Immunity

(2009) A.-F. Lin et al.   JOURNAL OF IMMUNOLOGY

Deep sequencing of the zebrafish transcriptome response to mycobacterium infection

(2009) Zoltán Hegedűs et al.   MOLECULAR IMMUNOLOGY

Single nucleotide polymorphism (SNP) discovery in the polyploidBrassica napususing Solexa transcriptome sequencing

(2009) Martin Trick et al.   PLANT BIOTECHNOLOGY JOURNAL

SOAP: short oligonucleotide alignment program

(2008) R. Li et al.   BIOINFORMATICS

ALLPATHS: De novo assembly of whole-genome shotgun microreads

(2008) J. Butler et al.   GENOME RESEARCH

The diploid genome sequence of an Asian individual

(2008) Jun Wang et al.   NATURE

Accurate whole human genome sequencing using reversible terminator chemistry

(2008) David R. Bentley et al.   NATURE

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE