Investigation of De Novo Unique Differentially Expressed Genes Related to Evolution in Exercise Response during Domestication in Thoroughbred Race Horses
出版年份 2014 全文链接
标题
Investigation of De Novo Unique Differentially Expressed Genes Related to Evolution in Exercise Response during Domestication in Thoroughbred Race Horses
作者
关键词
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出版物
PLoS One
Volume 9, Issue 3, Pages e91418
出版商
Public Library of Science (PLoS)
发表日期
2014-03-22
DOI
10.1371/journal.pone.0091418
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels
- (2012) Marcel H. Schulz et al. BIOINFORMATICS
- Whole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-Seq
- (2012) Kyung-Do Park et al. BMC GENOMICS
- Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome
- (2012) Zhiyu Peng et al. NATURE BIOTECHNOLOGY
- De novo transcriptome assembly of RNA-Seq reads with different strategies
- (2012) Geng Chen et al. Science China-Life Sciences
- Sensitive gene fusion detection using ambiguously mapping RNA-Seq read pairs
- (2011) Marcus Kinsella et al. BIOINFORMATICS
- The variant call format and VCFtools
- (2011) P. Danecek et al. BIOINFORMATICS
- Megakaryocytes differentially sort mRNAs for matrix metalloproteinases and their inhibitors into platelets: a mechanism for regulating synthetic events
- (2011) L. Cecchetti et al. BLOOD
- Revealing the missing expressed genes beyond the human reference genome by RNA-Seq
- (2011) Geng Chen et al. BMC GENOMICS
- Autophagy-related and autophagy-regulatory genes are induced in human muscle after ultraendurance exercise
- (2011) Cécile Jamart et al. EUROPEAN JOURNAL OF APPLIED PHYSIOLOGY
- How selective sweeps in domestic animals provide new insight into biological mechanisms
- (2011) L. Andersson JOURNAL OF INTERNAL MEDICINE
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- (2011) Mark A DePristo et al. NATURE GENETICS
- Computational methods for transcriptome annotation and quantification using RNA-seq
- (2011) Manuel Garber et al. NATURE METHODS
- RNA-Seq analysis and de novo transcriptome assembly of Hevea brasiliensis
- (2011) Zhihui Xia et al. PLANT MOLECULAR BIOLOGY
- Fast and accurate long-read alignment with Burrows–Wheeler transform
- (2010) Heng Li et al. BIOINFORMATICS
- Characterization of the equine skeletal muscle transcriptome identifies novel functional responses to exercise training
- (2010) Beatrice A McGivney et al. BMC GENOMICS
- Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads
- (2010) Jeffrey Martin et al. BMC GENOMICS
- Heart size estimated by echocardiography correlates with maximal oxygen uptake
- (2010) L. E. YOUNG et al. EQUINE VETERINARY JOURNAL
- Optimization of de novo transcriptome assembly from next-generation sequencing data
- (2010) Y. Surget-Groba et al. GENOME RESEARCH
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows
- (2010) LAURENT EXCOFFIER et al. Molecular Ecology Resources
- De novo assembly and analysis of RNA-seq data
- (2010) Gordon Robertson et al. NATURE METHODS
- Into the unknown: expression profiling without genome sequence information in CHO by next generation sequencing
- (2010) Fabian Birzele et al. NUCLEIC ACIDS RESEARCH
- High-Resolution Analysis of Parent-of-Origin Allelic Expression in the Mouse Brain
- (2010) C. Gregg et al. SCIENCE
- Simultaneous Genotype Calling and Haplotype Phasing Improves Genotype Accuracy and Reduces False-Positive Associations for Genome-wide Association Studies
- (2009) Brian L. Browning et al. AMERICAN JOURNAL OF HUMAN GENETICS
- De novo transcriptome assembly with ABySS
- (2009) I. Birol et al. BIOINFORMATICS
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- SOAP2: an improved ultrafast tool for short read alignment
- (2009) R. Li et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- The regulation of the endosomal compartment byp53the tumor suppressor gene
- (2009) Xin Yu et al. FEBS Journal
- The Red Blood Cell Proteome and Interactome: An Update
- (2009) Angelo D’Alessandro et al. JOURNAL OF PROTEOME RESEARCH
- Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
- (2009) Da Wei Huang et al. Nature Protocols
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- Role of p53 in mitochondrial biogenesis and apoptosis in skeletal muscle
- (2008) Ayesha Saleem et al. PHYSIOLOGICAL GENOMICS
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