4.6 Article

Characterization of Cell Wall Lipids from the Pathogenic Phase of Paracoccidioides brasiliensis Cultivated in the Presence or Absence of Human Plasma

期刊

PLOS ONE
卷 8, 期 5, 页码 -

出版社

PUBLIC LIBRARY SCIENCE
DOI: 10.1371/journal.pone.0063372

关键词

-

资金

  1. FAPESP
  2. CNPq
  3. NIH [G12MD007592, 5G12RR008124-16A1, 5G12RR008124-16A1S1]

向作者/读者索取更多资源

Background: The fungal cell wall is a complex and dynamic outer structure. In pathogenic fungi its components interact with the host, determining the infection fate. The present work aimed to characterize cell wall lipids from P. brasiliensis grown in the presence and absence of human plasma. We compared the results from isolates Pb3 and Pb18, which represent different phylogenetic species that evoke distinct patterns of experimental paracoccidioidomycosis. Methodology/Principal Findings: We comparatively characterized cell wall phospholipids, fatty acids, sterols, and neutral glycolipids by using both electrospray ionization- and gas chromatography-mass spectrometry analyses of lipids extracted with organic solvents followed by fractionation in silica-gel-60. We detected 49 phospholipid species in Pb3 and 38 in Pb18, including phosphatidylcholine, phosphatidylethanolamine, phosphatidylserine, phosphatidylglycerol, phosphatidylinositol, and phosphatidic acid. In both Pb3 and Pb18, PC and PE had the most numerous species. Among the fatty acids, C18:1 and C18:2 were the most abundant species in both isolates, although C18:2 was more abundant in Pb18. There was a different effect of plasma supplementation on fatty acids depending on the fungal isolate. The prevalent glycolipid species was HexC18:0-OH/d19:2-Cer, although other four minor species were also detected. The most abundant sterol in all samples was brassicasterol. Distinct profiles of cell wall and total yeast sterols suggested that the preparations were enriched for cell wall components. The presence of plasma in the culture medium specially increased cell wall brassicasterol abundance and also other lipids. Conclusions/Significance: We here report an original comparative lipidomic analysis of P. brasiliensis cell wall. Our results open doors to understanding the role of cell wall lipids in fungal biology, and interaction with anti-fungal drugs and the host.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.6
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Review Pharmacology & Pharmacy

GDF15: a potential therapeutic target for type 1 diabetes

Soumyadeep Sarkar, John T. Melchior, Hayden R. Henry, Farooq Syed, Raghavendra G. Mirmira, Ernesto S. Nakayasu, Thomas O. Metz

Summary: This paper discusses the potential role of GDF15 in preventing insulitis and protecting pancreatic beta cells against cellular stress. Although GDF15 shows promise as a potential intervention, further development is needed, and challenges such as anorexia and short half-life need to be addressed.

EXPERT OPINION ON THERAPEUTIC TARGETS (2022)

Article Biology

Legionella pneumophila modulates host energy metabolism by ADP-ribosylation of ADP/ATP translocases

Jiaqi Fu, Mowei Zhou, Marina A. Gritsenko, Ernesto S. Nakayasu, Lei Song, Zhao-Qing Luo

Summary: The intracellular pathogen Legionella pneumophila delivers effectors into host cells to modulate host energy metabolism, contributing to its virulence mechanism.
Article Chemistry, Analytical

DEIMoS: An Open-Source Tool for Processing High-Dimensional Mass Spectrometry Data

Sean M. Colby, Christine H. Chang, Jessica L. Bade, Jamie R. Nunez, Madison R. Blumer, Daniel J. Orton, Kent J. Bloodsworth, Ernesto S. Nakayasu, Richard D. Smith, Yehia M. Ibrahim, Ryan S. Renslow, Thomas O. Metz

Summary: DEIMoS is a Python tool for high-dimensional mass spectrometry data analysis that provides features such as feature detection, feature alignment, and calibration. It operates on N-dimensional data and can improve detection sensitivity and data alignment confidence while reducing artifacts in tandem mass spectra. The demonstration with metabolomics data shows the advantages of using DEIMoS in each data processing step.

ANALYTICAL CHEMISTRY (2022)

Article Microbiology

Regulation of Translation by Lysine Acetylation in Escherichia coli

Sarah C. Feid, Hanna E. Walukiewicz, Xiaoyi Wang, Ernesto S. Nakayasu, Christopher Rao, Alan J. Wolfe

Summary: Lysine acetylation inhibits translation by interfering with ribosome association, providing new insights into the mechanism and physiological effects of lysine acetylation.
Article Immunology

Extracellular Vesicles From Paracoccidioides brasiliensis Can Induce the Expression of Fungal Virulence Traits In Vitro and Enhance Infection in Mice

Carla Elizabete Octaviano, Nadiellen E. Abrantes, Rosana Puccia

Summary: Extracellular vesicles (EVs) play an important role in cell-cell communication, cell wall remodeling, and fungal virulence, especially in Paracoccidioides spp. In this study, the role of fungal EVs in oxidative and nitrosative stress sensitivity, as well as macrophage inflammatory response, was investigated. The results showed that EVs could affect the sensitivity to stress and induce inflammatory mediators in macrophages, thereby exacerbating murine pulmonary paracoccidioidomycosis.

FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2022)

Article Biochemical Research Methods

Uncovering Hidden Members and Functions of the Soil Microbiome Using De Novo Metaproteomics

Joon-Yong Lee, Hugh D. Mitchell, Meagan C. Burnet, Ruonan Wu, Sarah C. Jenson, Eric D. Merkley, Ernesto S. Nakayasu, Carrie D. Nicora, Janet K. Jansson, Kristin E. Burnum-Johnson, Samuel H. Payne

Summary: Metaproteomics is increasingly used for high-throughput characterization of proteins in complex environments, and the creation of a sample-specific protein sequence database is crucial for accurate analysis. This study presents a de novo peptide sequencing approach to identify sample composition directly from metaproteomic data, using a deep learning model trained on diverse bacteria. The results demonstrate the potential of this method as an alternative and complementary approach to construct sample-specific protein databases, particularly in the absence of matched metagenomes.

JOURNAL OF PROTEOME RESEARCH (2022)

Article Microbiology

Identification of Exported Plasmodium falciparum Proteins That Bind to the Erythrocyte Cytoskeleton

Bikash Shakya, Geoffrey Kimiti Kilili, Ling Wang, Ernesto S. Nakayasu, Douglas J. LaCount

Summary: Exported proteins play important roles in creating a favorable environment for Plasmodium replication. This study identified several putative exported P. falciparum proteins that interact with erythrocyte cytoskeletal proteins through biochemical screening and affinity purification methods.

MICROORGANISMS (2022)

Review Endocrinology & Metabolism

Extracellular vesicles in β cell biology: Role of lipids in vesicle biogenesis, cargo, and intercellular signaling

Rebecca S. Aguirre, Abhishek Kulkarni, Matthew W. Becker, Xiaoyong Lei, Soumyadeep Sarkar, Sasanka Ramanadham, Edward A. Phelps, Ernesto S. Nakayasu, Emily K. Sims, Raghavendra G. Mirmira

Summary: This review examines the impact of extracellular vesicles (EVs) released by pancreatic islet beta cells on the development of type 1 diabetes (T1D). The formation and cargo of EVs play important roles in the pathogenesis of T1D and have the potential to serve as biomarkers or therapeutic candidates.

MOLECULAR METABOLISM (2022)

Article Mycology

Paracoccidioides and Paracoccidioidomycosis in the 21st Century

Anderson Messias Rodrigues, Ferry Hagen, Rosana Puccia, Rosane Christine Hahn, Zoilo Pires de Camargo

Summary: Paracoccidioidomycosis (PCM) is a group of diseases caused by Paracoccidioides species. The genus has expanded to include seven species. Classic PCM affects the human lungs and may lead to systemic granulomatous disease, while PCM loboi and PCM ceti are observed as subcutaneous mycoses in humans and dolphins. Recognizing species boundaries in Paracoccidioides is crucial for understanding its ecology, evolution, clinical features, and strategies to mitigate PCM.

MYCOPATHOLOGIA (2023)

Review Microbiology

Interrogating the role of the milk microbiome in mastitis in the multi-omics era

Sneha P. Couvillion, Katie E. Mostoller, Janet E. Williams, Ryan M. Pace, Izabel L. Stohel, Haley K. Peterson, Carrie D. Nicora, Ernesto S. Nakayasu, Bobbie-Jo M. Webb-Robertson, Mark A. McGuire, Michelle K. McGuire, Thomas O. Metz

Summary: There is increasing interest in understanding the functional role of milk-associated microbiota due to their impact on host health and phenotype. Mastitis, a painful inflammation of the mammary gland, affects lactating humans and animals and has significant clinical and economic consequences. Alterations in milk microbial community composition have been observed in mastitis, suggesting a potential causal relationship with the host phenotype. Multi-omic approaches can provide mechanistic insights into how the milk microbiome modulates host physiology, informing strategies for mastitis prevention and treatment. This paper reviews existing studies utilizing omics approaches to investigate the role of the milk microbiome in mastitis, and discusses the strengths and challenges associated with different omics techniques.

FRONTIERS IN MICROBIOLOGY (2023)

Review Microbiology

The story of Paracoccidiodes gp43

Rosana Puccia, Carlos Peleschi Taborda

Summary: This review discusses Dr. Luiz Rodolpho Raja Gabaglia Travassos' scientific contributions to paracoccidioidomycosis. The review is co-written by Rosana Puccia and Dr. Carlos P. Taborda, who share personal anecdotes alongside recognizing Dr. Travassos' pioneering papers and scientific insights. The focus is on his contributions in biochemistry, immunology, cell biology, and molecular biology, particularly in relation to the Paracoccidioides antigen gp43. Dr. Travassos' impact on the scientific community is evident through numerous quality publications, as well as the lasting influence he had on those who worked with him.

BRAZILIAN JOURNAL OF MICROBIOLOGY (2023)

Article Microbiology

Rapid remodeling of the soil lipidome in response to a drying-rewetting event

Sneha P. Couvillion, Robert E. Danczak, Dan Naylor, Montana L. Smith, Kelly G. Stratton, Vanessa L. Paurus, Kent J. Bloodsworth, Yuliya Farris, Darren J. Schmidt, Rachel E. Richardson, Lisa M. Bramer, Sarah J. Fansler, Ernesto S. Nakayasu, Jason E. McDermott, Thomas O. Metz, Mary S. Lipton, Janet K. Jansson, Kirsten S. Hofmockel

Summary: Microbial lipids and metabolites in the soil play a critical role in regulating the microbial response to stress, especially during drying-rewetting cycles. This study revealed specific changes in lipids and metabolites that are indicative of stress adaptation, substrate use, and cellular recovery during soil drying and subsequent rewetting. The results underscore the importance of the soil lipidome as a robust indicator of microbial community responses.

MICROBIOME (2023)

Review Pharmacology & Pharmacy

Fatty acid-mediated signaling as a target for developing type 1 diabetes therapies

Ivo Diaz Ludovico, Soumyadeep Sarkar, Emily Elliott, Suvi M. Virtanen, Iris Erlund, Sasanka Ramanadham, Raghavendra G. Mirmira, Thomas O. Metz, Ernesto S. Nakayasu

Summary: This article provides an overview of the role of fatty acids in type 1 diabetes and their potential as therapeutic targets. It discusses the regulation of lipotoxicity and inflammatory response, the impact of diet on fatty acid availability and disease development, and avenues for further exploration.

EXPERT OPINION ON THERAPEUTIC TARGETS (2023)

Article Cell Biology

Plasma protein biomarkers predict the development of persistent autoantibodies and type 1 diabetes 6 months prior to the onset of autoimmunity

Ernesto S. Nakayasu, Lisa M. Bramer, Charles Ansong, Athena A. Schepmoes, Thomas L. Fillmore, Marina A. Gritsenko, Therese R. Clauss, Yuqian Gao, Paul D. Piehowski, Bryan A. Stanfill, Dave W. Engel, Daniel J. Orton, Ronald J. Moore, Wei-Jun Qian, Salvatore Sechi, Brigitte I. Frohnert, Jorma Toppari, Anette-G. Ziegler, Ake Lernmark, William Hagopian, Beena Akolkar, Richard D. Smith, Marian J. Rewers, Bobbie-Jo M. Webb-Robertson, Thomas O. Metz, Teddy Study Grp

Summary: Type 1 diabetes (T1D) is caused by autoimmune destruction of b cells. The insufficient availability of biomarkers hinders understanding of the disease. This study identifies and validates biomarkers predictive of T1D development through plasma proteomics, highlighting the pathways affected during T1D progression.

CELL REPORTS MEDICINE (2023)

Article Medicine, General & Internal

Elucidating regulatory processes of intense physical activity by multi-omics analysis

Ernesto S. Nakayasu, Marina A. Gritsenko, Young-Mo Kim, Jennifer E. Kyle, Kelly G. Stratton, Carrie D. Nicora, Nathalie Munoz, Kathleen M. Navarro, Daniel Claborne, Yuqian Gao, Karl K. Weitz, Vanessa L. Paurus, Kent J. Bloodsworth, Kelsey A. Allen, Lisa M. Bramer, Fernando Montes, Kathleen A. Clark, Grant Tietje, Justin Teeguarden, Kristin E. Burnum-Johnson

Summary: This study utilizes multi-omics analysis of biofluids to uncover simultaneous regulatory signatures during intense physical activity, providing insights into altered susceptibility to respiratory infections.

MILITARY MEDICAL RESEARCH (2023)

暂无数据