Deep phenotyping: deep learning for temporal phenotype/genotype classification

Deep Visual-Semantic Alignments for Generating Image Descriptions

(2017) Andrej Karpathy et al.   IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE

Watching plants grow – a position paper on computer vision and Arabidopsis thaliana

(2017) Jonathan Bell et al.   IET Computer Vision

Automated Identification of Northern Leaf Blight-Infected Maize Plants from Field Imagery Using Deep Learning

(2017) Chad DeChant et al.   PHYTOPATHOLOGY

Phenotiki: an open software and hardware platform for affordable and easy image-based phenotyping of rosette-shaped plants

(2017) Massimo Minervini et al.   PLANT JOURNAL

Deep Plant Phenomics: A Deep Learning Platform for Complex Plant Phenotyping Tasks

(2017) Jordan R. Ubbens et al.   Frontiers in Plant Science

Review of Plant Identification Based on Image Processing

(2016) Zhaobin Wang et al.   ARCHIVES OF COMPUTATIONAL METHODS IN ENGINEERING

1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana

(2016) Carlos Alonso-Blanco et al.   CELL

Image Harvest: an open-source platform for high-throughput plant image processing and analysis

(2016) Avi C. Knecht et al.   JOURNAL OF EXPERIMENTAL BOTANY

Effective Vision-based Classification for Separating Sugar Beets and Weeds for Precision Farming

(2016) Philipp Lottes et al.   Journal of Field Robotics

Finely-grained annotated datasets for image-based plant phenotyping

(2016) Massimo Minervini et al.   PATTERN RECOGNITION LETTERS

Machine Learning for Plant Phenotyping Needs Image Processing

(2016) Sotirios A. Tsaftaris et al.   TRENDS IN PLANT SCIENCE

Machine Learning for High-Throughput Stress Phenotyping in Plants

(2016) Arti Singh et al.   TRENDS IN PLANT SCIENCE

Using Deep Learning for Image-Based Plant Disease Detection

(2016) Sharada P. Mohanty et al.   Frontiers in Plant Science

Automatic classification of plants based on their leaves

(2015) Aimen Aakif et al.   BIOSYSTEMS ENGINEERING

Classification of plant species from images of overlapping leaves

(2015) Tapio Pahikkala et al.   COMPUTERS AND ELECTRONICS IN AGRICULTURE

Transcriptional regulation of phosphate transporters from Lolium perenne and its mycorrhizal symbionts in response to phosphorus supply

(2015) Qianhe Liu et al.   FUNCTIONAL PLANT BIOLOGY

Image Analysis: The New Bottleneck in Plant Phenotyping [Applications Corner]

(2015) Massimo Minervini et al.   IEEE SIGNAL PROCESSING MAGAZINE

A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria

(2015) Noah Fahlgren et al.   Molecular Plant

Genomic breeding for food, environment and livelihoods

(2015) John Rivers et al.   Food Security

Advanced phenotyping and phenotype data analysis for the study of plant growth and development

(2015) Md. Matiur Rahaman et al.   Frontiers in Plant Science

TraitCapture: genomic and environment modelling of plant phenomic data

(2014) Tim B Brown et al.   CURRENT OPINION IN PLANT BIOLOGY

Phenotyping and beyond: modelling the relationships between traits

(2014) Christine Granier et al.   CURRENT OPINION IN PLANT BIOLOGY

Dissecting the Phenotypic Components of Crop Plant Growth and Drought Responses Based on High-Throughput Image Analysis

(2014) Dijun Chen et al.   PLANT CELL

Objective Definition of Rosette Shape Variation Using a Combined Computer Vision and Data Mining Approach

(2014) Anyela Camargo et al.   PLoS One

Plant phenomics and high-throughput phenotyping: accelerating rice functional genomics using multidisciplinary technologies

(2013) Wanneng Yang et al.   CURRENT OPINION IN PLANT BIOLOGY

Cell to whole-plant phenotyping: the best is yet to come

(2013) Stijn Dhondt et al.   TRENDS IN PLANT SCIENCE

An image classification approach to analyze the suppression of plant immunity by the human pathogen Salmonella Typhimurium

(2012) Marek Schikora et al.   BMC BIOINFORMATICS

Inference Methods for CRFs with Co-occurrence Statistics

(2012) Ľubor Ladický et al.   INTERNATIONAL JOURNAL OF COMPUTER VISION

HTPheno: An image analysis pipeline for high-throughput plant phenotyping

(2011) Anja Hartmann et al.   BMC BIOINFORMATICS

Phenomics – technologies to relieve the phenotyping bottleneck

(2011) Robert T. Furbank et al.   TRENDS IN PLANT SCIENCE

leafprocessor: a new leaf phenotyping tool using contour bending energy and shape cluster analysis

(2010) Andreas Backhaus et al.   NEW PHYTOLOGIST