SECONDARY WALL ASSOCIATED MYB1 is a positive regulator of secondary cell wall thickening in Brachypodium distachyon and is not found in the Brassicaceae

Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape

(2016) Ronan C. O’Malley et al.   CELL

A systems-oriented analysis of the grapevine R2R3-MYB transcription factor family uncovers new insights into the regulation of stilbene accumulation

(2016) Darren Chern Jan Wong et al.   DNA RESEARCH

Overexpression ofSbMyb60impacts phenylpropanoid biosynthesis and alters secondary cell wall composition inSorghum bicolor

(2016) Erin D. Scully et al.   PLANT JOURNAL

Transcriptional Regulatory Network Analysis of MYB Transcription Factor Family Genes in Rice

(2015) Shuchi Smita et al.   Frontiers in Plant Science

The MYB46/MYB83-mediated transcriptional regulatory programme is a gatekeeper of secondary wall biosynthesis

(2014) J.-H. Ko et al.   ANNALS OF BOTANY

Comparative genomic analysis of the R2R3 MYB secondary cell wall regulators of Arabidopsis, poplar, rice, maize, and switchgrass

(2014) Kangmei Zhao et al.   BMC PLANT BIOLOGY

Genome-wide analysis of the R2R3-MYB transcription factor gene family in sweet orange (Citrus sinensis)

(2014) Chaoyang Liu et al.   MOLECULAR BIOLOGY REPORTS

An Arabidopsis gene regulatory network for secondary cell wall synthesis

(2014) M. Taylor-Teeples et al.   NATURE

TheEucalyptus grandisR2R3-MYB transcription factor family: evidence for woody growth-related evolution and function

(2014) Marçal Soler et al.   NEW PHYTOLOGIST

Identification of direct targets of transcription factor MYB46 provides insights into the transcriptional regulation of secondary wall biosynthesis

(2014) Won-Chan Kim et al.   PLANT MOLECULAR BIOLOGY

Functional characterization of cinnamyl alcohol dehydrogenase and caffeic acid O-methyltransferase in Brachypodium distachyon

(2013) Gina M Trabucco et al.   BMC BIOTECHNOLOGY

Perturbation of Brachypodium distachyon CELLULOSE SYNTHASE A4 or 7 results in abnormal cell walls

(2013) Pubudu P Handakumbura et al.   BMC PLANT BIOLOGY

Genome-Wide Identification and Evolutionary and Expression Analyses of MYB-Related Genes in Land Plants

(2013) H. Du et al.   DNA RESEARCH

Transcription factor MYB46 is an obligate component of the transcriptional regulatory complex for functional expression of secondary wall-associated cellulose synthases in Arabidopsis thaliana

(2013) Won-Chan Kim et al.   JOURNAL OF PLANT PHYSIOLOGY

Identification of Transcription Factors Involved in Rice Secondary Cell Wall Formation

(2013) Ko Hirano et al.   PLANT AND CELL PHYSIOLOGY

A TILLING Platform for Functional Genomics in Brachypodium distachyon

(2013) Marion Dalmais et al.   PLoS One

Cell Walls and the Developmental Anatomy of the Brachypodium distachyon Stem Internode

(2013) Dominick A. Matos et al.   PLoS One

Navigating the transcriptional roadmap regulating plant secondary cell wall deposition

(2013) Steven G. Hussey et al.   Frontiers in Plant Science

Biological conversion assay using Clostridium phytofermentans to estimate plant feedstock quality

(2012) Scott J Lee et al.   Biotechnology for Biofuels

Genome-wide classification and expression analysis of MYB transcription factor families in rice and Arabidopsis

(2012) Amit Katiyar et al.   BMC GENOMICS

Xylem tissue specification, patterning, and differentiation mechanisms

(2012) Mathias Schuetz et al.   JOURNAL OF EXPERIMENTAL BOTANY

AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network

(2012) Julia M. Romano et al.   NEW PHYTOLOGIST

Disrupting thecinnamyl alcohol dehydrogenase 1gene (BdCAD1) leads to altered lignification and improved saccharification inBrachypodium distachyon

(2012) Madeleine Bouvier d'Yvoire et al.   PLANT JOURNAL

Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis

(2012) Won-Chan Kim et al.   PLANT MOLECULAR BIOLOGY

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Transcriptional Regulation of Grass Secondary Cell Wall Biosynthesis: Playing Catch-Up with Arabidopsis thaliana

(2012) Pubudu P. Handakumbura et al.   Frontiers in Plant Science

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Functional characterization of the switchgrass (Panicum virgatum) R2R3-MYB transcription factor PvMYB4 for improvement of lignocellulosic feedstocks

(2011) Hui Shen et al.   NEW PHYTOLOGIST

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

MYB46 and MYB83 Bind to the SMRE Sites and Directly Activate a Suite of Transcription Factors and Secondary Wall Biosynthetic Genes

(2011) Ruiqin Zhong et al.   PLANT AND CELL PHYSIOLOGY

Transcriptional Activation of Secondary Wall Biosynthesis by Rice and Maize NAC and MYB Transcription Factors

(2011) R. Zhong et al.   PLANT AND CELL PHYSIOLOGY

PlaNet: Combined Sequence and Expression Comparisons across Plant Networks Derived from Seven Species

(2011) M. Mutwil et al.   PLANT CELL

A Comprehensive Benchmark Study of Multiple Sequence Alignment Methods: Current Challenges and Future Perspectives

(2011) Julie D. Thompson et al.   PLoS One

Phenological growth stages of Brachypodium distachyon: codification and description

(2011) S-Y HONG et al.   WEED RESEARCH

Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

(2010) Sven Heinz et al.   MOLECULAR CELL

Genome sequencing and analysis of the model grass Brachypodium distachyon

(2010) John P. Vogel et al.   NATURE

ZmMYB31 directly represses maize lignin genes and redirects the phenylpropanoid metabolic flux

(2010) Silvia Fornalé et al.   PLANT JOURNAL

Evolutionary conservation of the transcriptional network regulating secondary cell wall biosynthesis

(2010) Ruiqin Zhong et al.   TRENDS IN PLANT SCIENCE

MYB transcription factors in Arabidopsis

(2010) Christian Dubos et al.   TRENDS IN PLANT SCIENCE

Development and status of dedicated energy crops in the United States

(2009) Russell W. Jessup   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-PLANT

MYB83 Is a Direct Target of SND1 and Acts Redundantly with MYB46 in the Regulation of Secondary Cell Wall Biosynthesis in Arabidopsis

(2009) R. L. McCarthy et al.   PLANT AND CELL PHYSIOLOGY

MYB58 and MYB63 Are Transcriptional Activators of the Lignin Biosynthetic Pathway during Secondary Cell Wall Formation in Arabidopsis

(2009) J. Zhou et al.   PLANT CELL

Ectopic expression of MYB46 identifies transcriptional regulatory genes involved in secondary wall biosynthesis in Arabidopsis

(2009) Jae-Heung Ko et al.   PLANT JOURNAL

A Functional Genomics Approach Reveals CHE as a Component of the Arabidopsis Circadian Clock

(2009) J. L. Pruneda-Paz et al.   SCIENCE

Cellulosic Biofuels

(2008) Andrew Carroll et al.   Annual Review of Plant Biology

QuantPrime - a flexible tool for reliable high-throughput primer design for quantitative PCR

(2008) Samuel Arvidsson et al.   BMC BIOINFORMATICS

Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR

(2008) Shin-Young Hong et al.   BMC PLANT BIOLOGY

Unique aspects of the grass cell wall

(2008) J VOGEL   CURRENT OPINION IN PLANT BIOLOGY

A Battery of Transcription Factors Involved in the Regulation of Secondary Cell Wall Biosynthesis in Arabidopsis

(2008) R. Zhong et al.   PLANT CELL

Vectors for multi-color bimolecular fluorescence complementation to investigate protein-protein interactions in living plant cells

(2008) Lan-Ying Lee et al.   Plant Methods

Global Analysis of Arabidopsis Gene Expression Uncovers a Complex Array of Changes Impacting Pathogen Response and Cell Cycle during Geminivirus Infection

(2008) J. T. Ascencio-Ibanez et al.   PLANT PHYSIOLOGY

Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids

(2008) E. Lyons et al.   PLANT PHYSIOLOGY

Expansion and Diversification of the Populus R2R3-MYB Family of Transcription Factors

(2008) O. Wilkins et al.   PLANT PHYSIOLOGY