A DYW-protein knockout inPhyscomitrellaaffects two closely spaced mitochondrial editing sites and causes a severe developmental phenotype

Elucidation of the RNA Recognition Code for Pentatricopeptide Repeat Proteins Involved in Organelle RNA Editing in Plants

(2013) Yusuke Yagi et al.   PLoS One

An RNA recognition motif-containing protein is required for plastid RNA editing in Arabidopsis and maize

(2013) T. Sun et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Architecture of the PPR gene family in the mossPhyscomitrella patens

(2013) Mamoru Sugita et al.   RNA Biology

Comprehensive High-Resolution Analysis of the Role of an Arabidopsis Gene Family in RNA Editing

(2013) Stéphane Bentolila et al.   PLoS Genetics

Nuclear DYW-Type PPR Gene Families Diversify with Increasing RNA Editing Frequencies in Liverwort and Moss Mitochondria

(2012) Mareike Rüdinger et al.   JOURNAL OF MOLECULAR EVOLUTION

Two Interacting Proteins Are Necessary for the Editing of the NdhD-1 Site in Arabidopsis Plastids

(2012) C. Boussardon et al.   PLANT CELL

RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing

(2012) S. Bentolila et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants

(2012) M. Takenaka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Combinatorial Amino Acid Code for RNA Recognition by Pentatricopeptide Repeat Proteins

(2012) Alice Barkan et al.   PLoS Genetics

Diversification of land plants: insights from a family-level phylogenetic analysis

(2011) Omar Fiz-Palacios et al.   BMC EVOLUTIONARY BIOLOGY

The PPR-DYW proteins are required for RNA editing ofrps14,cox1andnad5transcripts inPhyscomitrella patensmitochondria

(2011) Masato Uchida et al.   FEBS LETTERS

Extreme RNA Editing in Coding Islands and Abundant Microsatellites in Repeat Sequences of Selaginella moellendorffii Mitochondria: The Root of Frequent Plant mtDNA Recombination in Early Tracheophytes

(2011) Julia Hecht et al.   Genome Biology and Evolution

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems

(2011) Lakshminarayan M. Iyer et al.   NUCLEIC ACIDS RESEARCH

Assigning DYW-type PPR proteins to RNA editing sites in the funariid mosses Physcomitrella patens and Funaria hygrometrica

(2011) Mareike Rüdinger et al.   PLANT JOURNAL

A PPR-DYW protein is required for splicing of a group II intron of cox1 pre-mRNA in Physcomitrella patens

(2011) Mizuho Ichinose et al.   PLANT JOURNAL

Selection patterns on restorer-like genes reveal a conflict between nuclear and mitochondrial genomes throughout angiosperm evolution

(2011) S. Fujii et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant-type mitochondrial RNA editing in the protist Naegleria gruberi

(2011) M. Rudinger et al.   RNA

Organellar RNA editing

(2011) Anne-Laure Chateigner-Boutin et al.   Wiley Interdisciplinary Reviews-RNA

When you can’t trust the DNA: RNA editing changes transcript sequences

(2010) Volker Knoop   CELLULAR AND MOLECULAR LIFE SCIENCES

DYW-type PPR proteins in a heterolobosean protist: Plant RNA editing factors involved in an ancient horizontal gene transfer?

(2010) Volker Knoop et al.   FEBS LETTERS

Targeted Gene Disruption Identifies Three PPR-DYW Proteins Involved in RNA Editing for Five Editing Sites of the Moss Mitochondrial Transcripts

(2010) Shotaro Ohtani et al.   PLANT AND CELL PHYSIOLOGY

The moss pentatricopeptide repeat protein with a DYW domain is responsible for RNA editing of mitochondrial ccmFc transcript

(2010) Eiji Tasaki et al.   PLANT JOURNAL

Plant RNA editing

(2010) Anne-Laure Chateigner-Boutin et al.   RNA Biology

RNA editing: only eleven sites are present in the Physcomitrella patens mitochondrial transcriptome and a universal nomenclature proposal

(2009) Mareike Rüdinger et al.   MOLECULAR GENETICS AND GENOMICS

The phylogeny of mosses – Addressing open issues with a new mitochondrial locus: Group I intron cobi420

(2009) Ute Wahrmund et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Pentatricopeptide Repeat Proteins with the DYW Motif Have Distinct Molecular Functions in RNA Editing and RNA Cleavage in Arabidopsis Chloroplasts

(2009) K. Okuda et al.   PLANT CELL

A DYW Domain-Containing Pentatricopeptide Repeat Protein Is Required for RNA Editing at Multiple Sites in Mitochondria of Arabidopsis thaliana

(2009) A. Zehrmann et al.   PLANT CELL

A Study of New Arabidopsis Chloroplast RNA Editing Mutants Reveals General Features of Editing Factors and Their Target Sites

(2009) K. Hammani et al.   PLANT CELL

A conserved DYW domain of the pentatricopeptide repeat protein possesses a novel endoribonuclease activity

(2008) Takahiro Nakamura et al.   FEBS LETTERS

Organellar RNA Editing and Plant-Specific Extensions of Pentatricopeptide Repeat Proteins in Jungermanniid but not in Marchantiid Liverworts

(2008) M. Rudinger et al.   MOLECULAR BIOLOGY AND EVOLUTION