Assigning DYW-type PPR proteins to RNA editing sites in the funariid mosses Physcomitrella patens and Funaria hygrometrica

Extreme RNA Editing in Coding Islands and Abundant Microsatellites in Repeat Sequences of Selaginella moellendorffii Mitochondria: The Root of Frequent Plant mtDNA Recombination in Early Tracheophytes

(2011) Julia Hecht et al.   Genome Biology and Evolution

When you can’t trust the DNA: RNA editing changes transcript sequences

(2010) Volker Knoop   CELLULAR AND MOLECULAR LIFE SCIENCES

RNA editing competence oftrans-factor MEF1 is modulated by ecotype-specific differences but requires the DYW domain

(2010) Anja Zehrmann et al.   FEBS LETTERS

DYW-type PPR proteins in a heterolobosean protist: Plant RNA editing factors involved in an ancient horizontal gene transfer?

(2010) Volker Knoop et al.   FEBS LETTERS

Extensive Loss of RNA Editing Sites in Rapidly Evolving Silene Mitochondrial Genomes: Selection vs. Retroprocessing as the Driving Force

(2010) D. B. Sloan et al.   GENETICS

Reverse Genetic Screening Identifies Five E-class PPR Proteins Involved in RNA Editing in Mitochondria ofArabidopsis thaliana

(2010) Mizuki Takenaka et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Generation-Biased Gene Expression in a Bryophyte Model System

(2010) P. Szovenyi et al.   MOLECULAR BIOLOGY AND EVOLUTION

A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte Isoetes engelmannii

(2010) Felix Grewe et al.   NUCLEIC ACIDS RESEARCH

Targeted Gene Disruption Identifies Three PPR-DYW Proteins Involved in RNA Editing for Five Editing Sites of the Moss Mitochondrial Transcripts

(2010) Shotaro Ohtani et al.   PLANT AND CELL PHYSIOLOGY

The SLO1 PPR protein is required for RNA editing at multiple sites with similar upstream sequences in Arabidopsis mitochondria

(2010) Tzu-Ying Sung et al.   PLANT JOURNAL

The moss pentatricopeptide repeat protein with a DYW domain is responsible for RNA editing of mitochondrial ccmFc transcript

(2010) Eiji Tasaki et al.   PLANT JOURNAL

Editing of accD and ndhF chloroplast transcripts is partially affected in the Arabidopsis vanilla cream1 mutant

(2010) Ching-Chih Tseng et al.   PLANT MOLECULAR BIOLOGY

Natural Variation in Arabidopsis Leads to the Identification of REME1, a Pentatricopeptide Repeat-DYW Protein Controlling the Editing of Mitochondrial Transcripts

(2010) S. Bentolila et al.   PLANT PHYSIOLOGY

Plant RNA editing

(2010) Anne-Laure Chateigner-Boutin et al.   RNA Biology

Introducing the plant RNA editing prediction and analysis computer tool PREPACT and an update on RNA editing site nomenclature

(2009) Henning Lenz et al.   CURRENT GENETICS

RNA editing: only eleven sites are present in the Physcomitrella patens mitochondrial transcriptome and a universal nomenclature proposal

(2009) Mareike Rüdinger et al.   MOLECULAR GENETICS AND GENOMICS

Prediction of dual protein targeting to plant organelles

(2009) Jan Mitschke et al.   NEW PHYTOLOGIST

Pentatricopeptide Repeat Proteins with the DYW Motif Have Distinct Molecular Functions in RNA Editing and RNA Cleavage in Arabidopsis Chloroplasts

(2009) K. Okuda et al.   PLANT CELL

A DYW Domain-Containing Pentatricopeptide Repeat Protein Is Required for RNA Editing at Multiple Sites in Mitochondria of Arabidopsis thaliana

(2009) A. Zehrmann et al.   PLANT CELL

A Study of New Arabidopsis Chloroplast RNA Editing Mutants Reveals General Features of Editing Factors and Their Target Sites

(2009) K. Hammani et al.   PLANT CELL

The pentatricopeptide repeat protein OTP82 is required for RNA editing of plastid ndhB and ndhG transcripts

(2009) Kenji Okuda et al.   PLANT JOURNAL

AtECB2, a pentatricopeptide repeat protein, is required for chloroplast transcriptaccDRNA editing and early chloroplast biogenesis inArabidopsis thaliana

(2009) Qing-Bo Yu et al.   PLANT JOURNAL

The PPR protein encoded by theLOVASTATIN INSENSITIVE 1gene is involved in RNA editing at three sites in mitochondria ofArabidopsis thaliana

(2009) Daniil Verbitskiy et al.   PLANT JOURNAL

LPA66 Is Required for Editing psbF Chloroplast Transcripts in Arabidopsis

(2009) W. Cai et al.   PLANT PHYSIOLOGY

MEF9, an E-Subclass Pentatricopeptide Repeat Protein, Is Required for an RNA Editing Event in the nad7 Transcript in Mitochondria of Arabidopsis

(2009) M. Takenaka   PLANT PHYSIOLOGY

A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript

(2009) J. C. Robbins et al.   RNA

A conserved DYW domain of the pentatricopeptide repeat protein possesses a novel endoribonuclease activity

(2008) Takahiro Nakamura et al.   FEBS LETTERS

Organellar RNA Editing and Plant-Specific Extensions of Pentatricopeptide Repeat Proteins in Jungermanniid but not in Marchantiid Liverworts

(2008) M. Rudinger et al.   MOLECULAR BIOLOGY AND EVOLUTION

On the Expansion of the Pentatricopeptide Repeat Gene Family in Plants

(2008) N. O'Toole et al.   MOLECULAR BIOLOGY AND EVOLUTION

Amino acid sequence variations in Nicotiana CRR4 orthologs determine the species-specific efficiency of RNA editing in plastids

(2008) Kenji Okuda et al.   NUCLEIC ACIDS RESEARCH

CLB19, a pentatricopeptide repeat protein required for editing ofrpoAandclpPchloroplast transcripts

(2008) Anne-Laure Chateigner-Boutin et al.   PLANT JOURNAL

The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth

(2008) Wenbin Zhou et al.   PLANT JOURNAL

Pentatricopeptide repeat proteins: a socket set for organelle gene expression

(2008) C SCHMITZLINNEWEBER et al.   TRENDS IN PLANT SCIENCE