Evolutionary and comparative analysis of MYB and bHLH plant transcription factors

An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae

(2010) Kui Lin-Wang et al.   BMC PLANT BIOLOGY

Photoperiod-dependent regulation of cell growth by PpCCA1a and PpCCA1b genes encoding single-myb clock proteins in the moss Physcomitrella patens

(2010) Ryo Okada et al.   GENES & GENETIC SYSTEMS

Flavonoid Phytoalexin-Dependent Resistance to Anthracnose Leaf Blight Requires a Functional yellow seed1 in Sorghum bicolor

(2010) F. Ibraheem et al.   GENETICS

An L1 box binding protein, GbML1, interacts with GbMYB25 to control cotton fibre development

(2010) Fei Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Regulation of tissue-specific expression of SPATULA, a bHLH gene involved in carpel development, seedling germination, and lateral organ growth in Arabidopsis

(2010) Michael Groszmann et al.   JOURNAL OF EXPERIMENTAL BOTANY

Subgroup 4 R2R3-MYBs in conifer trees: gene family expansion and contribution to the isoprenoid- and flavonoid-oriented responses

(2010) Frank Bedon et al.   JOURNAL OF EXPERIMENTAL BOTANY

A basic helix-loop-helix transcription factor controls cell growth and size in root hairs

(2010) Keke Yi et al.   NATURE GENETICS

Comparative Analysis of the Triplicate Proathocyanidin Regulators in Lotus japonicus

(2010) Kazuko Yoshida et al.   PLANT AND CELL PHYSIOLOGY

Regulation of Cell Proliferation in the Stomatal Lineage by the Arabidopsis MYB FOUR LIPS via Direct Targeting of Core Cell Cycle Genes

(2010) Z. Xie et al.   PLANT CELL

A WD40-repeat gene from Malus × domestica is a functional homologue of Arabidopsis thaliana TRANSPARENT TESTA GLABRA1

(2010) Julian Brueggemann et al.   PLANT CELL REPORTS

Cloning and characterization of a UV-B-inducible maize flavonol synthase

(2010) Maria Lorena Falcone Ferreyra et al.   PLANT JOURNAL

ZmMYB31 directly represses maize lignin genes and redirects the phenylpropanoid metabolic flux

(2010) Silvia Fornalé et al.   PLANT JOURNAL

Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.)

(2010) J. T. Matus et al.   PLANT MOLECULAR BIOLOGY

Genome-Wide Classification and Evolutionary Analysis of the bHLH Family of Transcription Factors in Arabidopsis, Poplar, Rice, Moss, and Algae

(2010) L. Carretero-Paulet et al.   PLANT PHYSIOLOGY

MYB75 Functions in Regulation of Secondary Cell Wall Formation in the Arabidopsis Inflorescence Stem

(2010) A. Bhargava et al.   PLANT PHYSIOLOGY

Characterization of FaSPT, a SPATULA gene encoding a bHLH transcriptional factor from the non-climacteric strawberry fruit

(2010) Viktória Tisza et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Isolation and functional characterization of a floral tissue-specific R2R3 MYB regulator from tobacco

(2010) Sitakanta Pattanaik et al.   PLANTA

MYB transcription factors in Arabidopsis

(2010) Christian Dubos et al.   TRENDS IN PLANT SCIENCE

Transposed Genes in Arabidopsis Are Often Associated with Flanking Repeats

(2010) Margaret R. Woodhouse et al.   PLoS Genetics

A Central Regulatory System Largely Controls Transcriptional Activation and Repression Responses to Phosphate Starvation in Arabidopsis

(2010) Regla Bustos et al.   PLoS Genetics

The Biology of Chromatin Remodeling Complexes

(2009) Cedric R. Clapier et al.   Annual Review of Biochemistry

Cell fate transitions during stomatal development

(2009) Laura Serna   BIOESSAYS

A Multiparameter Network Reveals Extensive Divergence between C. elegans bHLH Transcription Factors

(2009) Christian A. Grove et al.   CELL

A transcription factor with a bHLH domain regulates root hair development in rice

(2009) Wona Ding et al.   CELL RESEARCH

Plant Development: PIF4 Integrates Diverse Environmental Signals

(2009) Doris Lucyshyn et al.   CURRENT BIOLOGY

One, two, three…models for trichome patterning in Arabidopsis?

(2009) Marina Pesch et al.   CURRENT OPINION IN PLANT BIOLOGY

Orthologs of Arabidopsis thaliana stomatal bHLH genes and regulation of stomatal development in grasses

(2009) T. Liu et al.   DEVELOPMENT

Jasmonic acid control of GLABRA3 links inducible defense and trichome patterning in Arabidopsis

(2009) Y. Yoshida et al.   DEVELOPMENT

Functional diversity of R3 single-repeat genes in trichome development

(2009) K. Wester et al.   DEVELOPMENT

Origin and Diversification of Basic-Helix-Loop-Helix Proteins in Plants

(2009) N. Pires et al.   MOLECULAR BIOLOGY AND EVOLUTION

CPC, a Single-Repeat R3 MYB, Is a Negative Regulator of Anthocyanin Biosynthesis in Arabidopsis

(2009) Hui-Fen Zhu et al.   Molecular Plant

Protein structure prediction on the Web: a case study using the Phyre server

(2009) Lawrence A Kelley et al.   Nature Protocols

Conservation and diversification of the symmetry developmental program among close relatives of snapdragon with divergent floral morphologies

(2009) Jill C. Preston et al.   NEW PHYTOLOGIST

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

The bHLH Transcription Factor SPATULA Controls Final Leaf Size in Arabidopsis thaliana

(2009) Yasunori Ichihashi et al.   PLANT AND CELL PHYSIOLOGY

The Arabidopsis MYB5 Transcription Factor Regulates Mucilage Synthesis, Seed Coat Development, and Trichome Morphogenesis

(2009) S. F. Li et al.   PLANT CELL

Genome-Wide Analysis of Genes Targeted by PHYTOCHROME INTERACTING FACTOR 3-LIKE5 during Seed Germination in Arabidopsis

(2009) E. Oh et al.   PLANT CELL

FAR-RED ELONGATED HYPOCOTYL1 and FHY1-LIKE Associate with the Arabidopsis Transcription Factors LAF1 and HFR1 to Transmit Phytochrome A Signals for Inhibition of Hypocotyl Elongation

(2009) S. W. Yang et al.   PLANT CELL

Functional characterization ofCCA1/LHYhomolog genes,PpCCA1aandPpCCA1b, in the mossPhyscomitrella patens

(2009) Ryo Okada et al.   PLANT JOURNAL

The GLABRA2 homeodomain protein directly regulatesCESA5andXTH17gene expression in Arabidopsis roots

(2009) Rumi Tominaga-Wada et al.   PLANT JOURNAL

The MYB transcription factor GhMYB25 regulates early fibre and trichome development

(2009) Adriane Machado et al.   PLANT JOURNAL

The maize ZmMYB42 represses the phenylpropanoid pathway and affects the cell wall structure, composition and degradability in Arabidopsis thaliana

(2009) Fathi-Mohamed Sonbol et al.   PLANT MOLECULAR BIOLOGY

CIRCADIAN CLOCK ASSOCIATED1 and LATE ELONGATED HYPOCOTYL Function Synergistically in the Circadian Clock of Arabidopsis

(2009) S. X. Lu et al.   PLANT PHYSIOLOGY

Preferential Up-Regulation of G2/M Phase-Specific Genes by Overexpression of the Hyperactive Form of NtmybA2 Lacking Its Negative Regulation Domain in Tobacco BY-2 Cells

(2009) K. Kato et al.   PLANT PHYSIOLOGY

Conservation of Lotus and Arabidopsis Basic Helix-Loop-Helix Proteins Reveals New Players in Root Hair Development

(2009) B. Karas et al.   PLANT PHYSIOLOGY

Enhanced Tolerance to Chilling Stress in OsMYB3R-2 Transgenic Rice Is Mediated by Alteration in Cell Cycle and Ectopic Expression of Stress Genes

(2009) Q. Ma et al.   PLANT PHYSIOLOGY

The Grapevine R2R3-MYB Transcription Factor VvMYBF1 Regulates Flavonol Synthesis in Developing Grape Berries

(2009) S. Czemmel et al.   PLANT PHYSIOLOGY

A MYB transcription factor regulates anthocyanin biosynthesis in mangosteen (Garcinia mangostana L.) fruit during ripening

(2009) Yossapol Palapol et al.   PLANTA

Target Genes of the MADS Transcription Factor SEPALLATA3: Integration of Developmental and Hormonal Pathways in the Arabidopsis Flower

(2009) Kerstin Kaufmann et al.   PLOS BIOLOGY

A Systems Approach Reveals Regulatory Circuitry for Arabidopsis Trichome Initiation by the GL3 and GL1 Selectors

(2009) Kengo Morohashi et al.   PLoS Genetics

A Genetic Regulatory Network in the Development of Trichomes and Root Hairs

(2008) Tetsuya Ishida et al.   Annual Review of Plant Biology

Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes

(2008) F. Burki et al.   Biology Letters

Analysis of the grape MYB R2R3 subfamily reveals expanded wine quality-related clades and conserved gene structure organization across Vitis and Arabidopsis genomes

(2008) José Matus et al.   BMC PLANT BIOLOGY

Multiple Phytochrome-Interacting bHLH Transcription Factors Repress Premature Seedling Photomorphogenesis in Darkness

(2008) Pablo Leivar et al.   CURRENT BIOLOGY

Stomatal development: new signals and fate determinants

(2008) Jeanette A Nadeau   CURRENT OPINION IN PLANT BIOLOGY

The TTG1-bHLH-MYB complex controls trichome cell fate and patterning through direct targeting of regulatory loci

(2008) M. Zhao et al.   DEVELOPMENT

TTG1 complex MYBs, MYB5 and TT2, control outer seed coat differentiation

(2008) Antonio Gonzalez et al.   DEVELOPMENTAL BIOLOGY

Fbxw7 Acts as an E3 Ubiquitin Ligase That Targets c-Myb for Nemo-like Kinase (NLK)-induced Degradation

(2008) Chie Kanei-Ishii et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The HD-Zip IV geneGaHOX1from cotton is a functional homologue of theArabidopsis GLABRA2

(2008) Xue-Ying Guan et al.   PHYSIOLOGIA PLANTARUM

Identification and Characterization of R2R3-MYB and bHLH Transcription Factors Regulating Anthocyanin Biosynthesis in Gentian Flowers

(2008) Takashi Nakatsuka et al.   PLANT AND CELL PHYSIOLOGY

Direct Repression of KNOX Loci by the ASYMMETRIC LEAVES1 Complex of Arabidopsis

(2008) M. Guo et al.   PLANT CELL

SCREAM/ICE1 and SCREAM2 Specify Three Cell-State Transitional Steps Leading to Arabidopsis Stomatal Differentiation

(2008) M. M. Kanaoka et al.   PLANT CELL

Functional domains of SPATULA, a bHLH transcription factor involved in carpel and fruit development in Arabidopsis

(2008) Michael Groszmann et al.   PLANT JOURNAL

MYBL2 is a new regulator of flavonoid biosynthesis inArabidopsis thaliana

(2008) Christian Dubos et al.   PLANT JOURNAL

AtMYBL2, a protein with a single MYB domain, acts as a negative regulator of anthocyanin biosynthesis in Arabidopsis

(2008) Kyoko Matsui et al.   PLANT JOURNAL

Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5

(2008) Moussa Benhamed et al.   PLANT JOURNAL

Transcriptional Profiling of Mature Arabidopsis Trichomes Reveals That NOECK Encodes the MIXTA-Like Transcriptional Regulator MYB106

(2008) M. J. Jakoby et al.   PLANT PHYSIOLOGY

Expansion and Diversification of the Populus R2R3-MYB Family of Transcription Factors

(2008) O. Wilkins et al.   PLANT PHYSIOLOGY