Rapid simulation of protein motion: merging flexibility, rigidity and normal mode analyses

Redox-Dependent Domain Rearrangement of Protein Disulfide Isomerase from a Thermophilic Fungus

(2010) Masayoshi Nakasako et al.   BIOCHEMISTRY

Normal mode analysis and applications in biological physics

(2010) Eric C Dykeman et al.   JOURNAL OF PHYSICS-CONDENSED MATTER

Generating stereochemically acceptable protein pathways

(2010) Daniel W. Farrell et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Atomic-Level Characterization of the Structural Dynamics of Proteins

(2010) D. E. Shaw et al.   SCIENCE

Normal Mode Analysis of Biomolecular Structures: Functional Mechanisms of Membrane Proteins

(2009) Ivet Bahar et al.   CHEMICAL REVIEWS

The structural dynamics of macromolecular processes

(2009) Daniel Russel et al.   CURRENT OPINION IN CELL BIOLOGY

Multiscale methods for macromolecular simulations

(2008) Paul Sherwood et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

The Catalytic Activity of Protein-disulfide Isomerase Requires a Conformationally Flexible Molecule

(2008) Geng Tian et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

X-ray structure of a prokaryotic pentameric ligand-gated ion channel

(2008) Ricarda J. C. Hilf et al.   NATURE

Fitting Low-Resolution Cryo-EM Maps of Proteins Using Constrained Geometric Simulations

(2007) Craig C. Jolley et al.   BIOPHYSICAL JOURNAL

Coarse-grained models of protein folding: toy models or predictive tools?

(2007) Cecilia Clementi   CURRENT OPINION IN STRUCTURAL BIOLOGY