Multiplex sequencing of pooled mitochondrial genomes—a crucial step toward biodiversity analysis using mito-metagenomics
出版年份 2014 全文链接
标题
Multiplex sequencing of pooled mitochondrial genomes—a crucial step toward biodiversity analysis using mito-metagenomics
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume 42, Issue 22, Pages e166-e166
出版商
Oxford University Press (OUP)
发表日期
2014-10-08
DOI
10.1093/nar/gku917
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads
- (2014) Y. Xie et al. BIOINFORMATICS
- Sequence analysis of mitochondrial ND1 gene can reveal the genetic structure and origin of Bactrocera dorsalis s.s.
- (2014) Zhong-Zhen Wu et al. BMC EVOLUTIONARY BIOLOGY
- Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny
- (2013) Stephen L. Cameron Annual Review of Entomology
- The complete mitochondrial genome of a turbinid vetigastropod from MiSeq Illumina sequencing of genomic DNA and steps towards a resolved gastropod phylogeny
- (2013) S.T. Williams et al. GENE
- Deep Sequencing of Mixed Total DNA without Barcodes Allows Efficient Assembly of Highly Plastic Ascidian Mitochondrial Genomes
- (2013) Nimrod D. Rubinstein et al. Genome Biology and Evolution
- Evaluation of 11 single-locus and seven multilocus DNA barcodes inLamiumL. (Lamiaceae)
- (2013) K. Krawczyk et al. Molecular Ecology Resources
- Next-generation sequencing and phylogenetic signal of complete mitochondrial genomes for resolving the evolutionary history of leaf-nosed bats (Phyllostomidae)
- (2013) Fidel Botero-Castro et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach
- (2013) Christoph Hahn et al. NUCLEIC ACIDS RESEARCH
- A multi-locus approach to barcoding in the Anopheles strodei subgroup (Diptera: Culicidae)
- (2013) Brian Patrick Bourke et al. Parasites & Vectors
- Improved Inference of Taxonomic Richness from Environmental DNA
- (2013) Matthew J. Morgan et al. PLoS One
- SOAPBarcode: revealing arthropod biodiversity through assembly of Illumina shotgun sequences of PCR amplicons
- (2013) Shanlin Liu et al. Methods in Ecology and Evolution
- Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification
- (2013) Xin Zhou et al. GigaScience
- IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
- (2012) Y. Peng et al. BIOINFORMATICS
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- (2012) M. Kearse et al. BIOINFORMATICS
- The complete mitogenome of Cylindrus obtusus (Helicidae, Ariantinae) using Illumina next generation sequencing
- (2012) Dick SJ Groenenberg et al. BMC GENOMICS
- A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers
- (2012) Michael Quail et al. BMC GENOMICS
- Coalescent-Based DNA Barcoding: Multilocus Analysis and Robustness
- (2012) Olivier David et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Multi-locus species delimitation in closely related animals and fungi: one marker is not enough
- (2012) JULIAN R. DUPUIS et al. MOLECULAR ECOLOGY
- Towards next-generation biodiversity assessment using DNA metabarcoding
- (2012) PIERRE TABERLET et al. MOLECULAR ECOLOGY
- Rapid Sequencing of the Bamboo Mitochondrial Genome Using Illumina Technology and Parallel Episodic Evolution of Organelle Genomes in Grasses
- (2012) Peng-Fei Ma et al. PLoS One
- Assessment of Three Mitochondrial Genes (16S, Cytb, CO1) for Identifying Species in the Praomyini Tribe (Rodentia: Muridae)
- (2012) Violaine Nicolas et al. PLoS One
- Conveniently Pre-Tagged and Pre-Packaged: Extended Molecular Identification and Metagenomics Using Complete Metazoan Mitochondrial Genomes
- (2012) Agnes Dettai et al. PLoS One
- Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring
- (2012) Douglas W. Yu et al. Methods in Ecology and Evolution
- SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
- (2012) Ruibang Luo et al. GigaScience
- Limited efficiency of universal mini-barcode primers for DNA amplification from desert reptiles, birds and mammals
- (2011) I.A. Arif et al. GENETICS AND MOLECULAR RESEARCH
- Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
- (2011) B. J. Haas et al. GENOME RESEARCH
- MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
- (2011) K. Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases
- (2010) Eva Bellemain et al. BMC MICROBIOLOGY
- Multilocus species identification and fungal DNA barcoding: insights from blue stain fungal symbionts of the mountain pine beetle
- (2010) AMANDA D. ROE et al. Molecular Ecology Resources
- Why barcode? High-throughput multiplex sequencing of mitochondrial genomes for molecular systematics
- (2010) M. J. T. N. Timmermans et al. NUCLEIC ACIDS RESEARCH
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- De novo assembly of human genomes with massively parallel short read sequencing
- (2009) R. Li et al. GENOME RESEARCH
- A DNA barcode for land plants
- (2009) et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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