标题
Comparative analysis of regulatory information and circuits across distant species
作者
关键词
-
出版物
NATURE
Volume 512, Issue 7515, Pages 453-456
出版商
Springer Nature
发表日期
2014-08-26
DOI
10.1038/nature13668
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Comparison of D. melanogaster and C. elegans developmental stages, tissues, and cells by modENCODE RNA-seq data
- (2014) J. J. Li et al. GENOME RESEARCH
- Transcription Factor Binding in Human Cells Occurs in Dense Clusters Formed around Cohesin Anchor Sites
- (2013) Jian Yan et al. CELL
- Dynamic trans-Acting Factor Colocalization in Human Cells
- (2013) Dan Xie et al. CELL
- Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins
- (2013) L. Teytelman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- An effective statistical evaluation of ChIPseq dataset similarity
- (2012) Maria D. Chikina et al. BIOINFORMATICS
- HOT regions function as patterned developmental enhancers and have a distinct cis-regulatory signature
- (2012) E. Z. Kvon et al. GENES & DEVELOPMENT
- Unified modeling of gene duplication, loss, and coalescence using a locus tree
- (2012) M. D. Rasmussen et al. GENOME RESEARCH
- Cohesin regulates tissue-specific expression by stabilizing highly occupied cis-regulatory modules
- (2012) A. J. Faure et al. GENOME RESEARCH
- ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
- (2012) S. G. Landt et al. GENOME RESEARCH
- Transcription factors: from enhancer binding to developmental control
- (2012) François Spitz et al. NATURE REVIEWS GENETICS
- TreeFix: Statistically Informed Gene Tree Error Correction Using Species Trees
- (2012) Yi-Chieh Wu et al. SYSTEMATIC BIOLOGY
- Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors
- (2012) Kevin Y Yip et al. GENOME BIOLOGY
- Measuring reproducibility of high-throughput experiments
- (2011) Qunhua Li et al. Annals of Applied Statistics
- TIP: A probabilistic method for identifying transcription factor target genes from ChIP-seq binding profiles
- (2011) Chao Cheng et al. BIOINFORMATICS
- Identification of novel transcripts in annotated genomes using RNA-Seq
- (2011) A. Roberts et al. BIOINFORMATICS
- Evolution of Gene Regulatory Networks Controlling Body Plan Development
- (2011) Isabelle S. Peter et al. CELL
- A cis-regulatory map of the Drosophila genome
- (2011) Nicolas Nègre et al. NATURE
- High conservation of transcription factor binding and evidence for combinatorial regulation across six Drosophila species
- (2011) Qiye He et al. NATURE GENETICS
- ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data
- (2010) Lihua J Zhu et al. BMC BIOINFORMATICS
- Comparative Epigenomic Analysis of Murine and Human Adipogenesis
- (2010) Tarjei S. Mikkelsen et al. CELL
- Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding
- (2010) D. Schmidt et al. SCIENCE
- Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE
- (2010) et al. SCIENCE
- Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project
- (2010) M. B. Gerstein et al. SCIENCE
- Evolutionary Tinkering with Conserved Components of a Transcriptional Regulatory Network
- (2010) Hugo Lavoie et al. PLOS BIOLOGY
- Genome-Wide Identification of Binding Sites Defines Distinct Functions for Caenorhabditis elegans PHA-4/FOXA in Development and Environmental Response
- (2010) Mei Zhong et al. PLoS Genetics
- Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing
- (2009) Philippe Lefrançois et al. BMC GENOMICS
- Versatile P[acman] BAC libraries for transgenesis studies in Drosophila melanogaster
- (2009) Koen J T Venken et al. NATURE METHODS
- Variation in Homeodomain DNA Binding Revealed by High-Resolution Analysis of Sequence Preferences
- (2008) Michael F. Berger et al. CELL
- High-Resolution Mapping and Characterization of Open Chromatin across the Genome
- (2008) Alan P. Boyle et al. CELL
- EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates
- (2008) A. J. Vilella et al. GENOME RESEARCH
- Design and analysis of ChIP-seq experiments for DNA-binding proteins
- (2008) Peter V Kharchenko et al. NATURE BIOTECHNOLOGY
- UniPROBE: an online database of protein binding microarray data on protein-DNA interactions
- (2008) D. E. Newburger et al. NUCLEIC ACIDS RESEARCH
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started