Environmental systems biology of cold-tolerant phenotype inSaccharomycesspecies adapted to grow at different temperatures

Enhanced Enzymatic Activity of Glycerol-3-Phosphate Dehydrogenase from the Cryophilic Saccharomyces kudriavzevii

(2014) Bruno M. Oliveira et al.   PLoS One

Characterization and Prediction of Haploinsufficiency Using Systems-Level Gene Properties in Yeast

(2013) Matthew Norris et al.   G3-Genes Genomes Genetics

Similar temperature dependencies of glycolytic enzymes: an evolutionary adaptation to temperature dynamics?

(2012) Luisa Ana B Cruz et al.   BMC Systems Biology

System-Level Insights into Yeast Metabolism by Thermodynamic Analysis of Elementary Flux Modes

(2012) Stefan J. Jol et al.   PLoS Computational Biology

Temperature Adaptation Markedly Determines Evolution within the GenusSaccharomyces

(2011) Z. Salvadó et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Different effects of temperature on foraging activity schedules in sympatric Myrmecia ants

(2011) P. Jayatilaka et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Thermal niche separation in two sympatric tropical intertidal Laternula (Bivalvia: Anomalodesmata)

(2011) C.H. Lai et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Towards a genome-scale kinetic model of cellular metabolism

(2010) Kieran Smallbone et al.   BMC Systems Biology

Modulation of the glycerol and ethanol syntheses in the yeast Saccharomyces kudriavzevii differs from that exhibited by Saccharomyces cerevisiae and their hybrid

(2010) F. Noé Arroyo-López et al.   FOOD MICROBIOLOGY

Integrated stoichiometric, thermodynamic and kinetic modelling of steady state metabolism

(2010) R.M.T. Fleming et al.   JOURNAL OF THEORETICAL BIOLOGY

Highly-multiplexed barcode sequencing: an efficient method for parallel analysis of pooled samples

(2010) A. M. Smith et al.   NUCLEIC ACIDS RESEARCH

Connecting extracellular metabolomic measurements to intracellular flux states in yeast

(2009) Monica L Mo et al.   BMC Systems Biology

The role of acetaldehyde and glycerol in the adaptation to ethanol stress ofSaccharomyces cerevisiaeand other yeasts

(2009) Frank Vriesekoop et al.   FEMS YEAST RESEARCH

Quantitative phenotyping via deep barcode sequencing

(2009) A. M. Smith et al.   GENOME RESEARCH

Effects of temperature, pH and sugar concentration on the growth parameters of Saccharomyces cerevisiae, S. kudriavzevii and their interspecific hybrid

(2009) F. Noé Arroyo-López et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Model-driven evaluation of the production potential for growth-coupled products of Escherichia coli

(2009) Adam M. Feist et al.   METABOLIC ENGINEERING

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

BioNumbers—the database of key numbers in molecular and cell biology

(2009) Ron Milo et al.   NUCLEIC ACIDS RESEARCH

Natural Populations of Saccharomyces kudriavzevii in Portugal Are Associated with Oak Bark and Are Sympatric with S. cerevisiae and S. paradoxus

(2008) J. P. Sampaio et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Group Contribution Method for Thermodynamic Analysis of Complex Metabolic Networks

(2008) Matthew D. Jankowski et al.   BIOPHYSICAL JOURNAL

Quantitative Analysis of the High Temperature-induced Glycolytic Flux Increase inSaccharomyces cerevisiaeReveals Dominant Metabolic Regulation

(2008) Jarne Postmus et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

(2008) Markus J Herrgård et al.   NATURE BIOTECHNOLOGY

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH