Ecological and evolutionary genomics of marine photosynthetic organisms

Photorespiration and the Evolution of C4Photosynthesis

(2012) Rowan F. Sage et al.   Annual Review of Plant Biology

Marine Viruses Exploit Their Host's Two-Component Regulatory System in Response to Resource Limitation

(2012) Qinglu Zeng et al.   CURRENT BIOLOGY

Genomics of brown algae: current advances and future prospects

(2012) J. Mark Cock et al.   Genes & Genomics

Dinitrogen fixation in a unicellular chlorophyll d-containing cyanobacterium

(2012) Ulrike Pfreundt et al.   ISME Journal

Rapid diversification of coevolving marine Synechococcus and a virus

(2012) M. F. Marston et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins

(2012) F. Burki et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropsis gaditana

(2012) Randor Radakovits et al.   Nature Communications

Picocyanobacterial abundances and diversity in surface water of the northwestern Pacific Ocean

(2012) Dong Han Choi et al.   Ocean Science Journal

Progress in Understanding Harmful Algal Blooms: Paradigm Shifts and New Technologies for Research, Monitoring, and Management

(2011) Donald M. Anderson et al.   Annual Review of Marine Science

Into the deep: New discoveries at the base of the green plant phylogeny

(2011) Frederik Leliaert et al.   BIOESSAYS

Genome fluctuations in cyanobacteria reflect evolutionary, developmental and adaptive traits

(2011) John Larsson et al.   BMC EVOLUTIONARY BIOLOGY

Identification and characterization of microRNAs from Phaeodactylum tricornutum by high-throughput sequencing and bioinformatics analysis

(2011) Aiyou Huang et al.   BMC GENOMICS

Defense mechanisms against herbivory in Picea: sequence evolution and expression regulation of gene family members in the phenylpropanoid pathway

(2011) Ilga Porth et al.   BMC GENOMICS

Dynamic proteomic profiling of a unicellular cyanobacterium Cyanothece ATCC51142 across light-dark diurnal cycles

(2011) Uma K Aryal et al.   BMC Systems Biology

Brown algae

(2011) J. Mark Cock et al.   CURRENT BIOLOGY

Multi-locus sequence analysis, taxonomic resolution and biogeography of marine Synechococcus

(2011) Sophie Mazard et al.   ENVIRONMENTAL MICROBIOLOGY

Phosphite utilization by the marine picocyanobacterium Prochlorococcus MIT9301

(2011) Asunción Martínez et al.   ENVIRONMENTAL MICROBIOLOGY

RNA-Mediated Silencing in Algae: Biological Roles and Tools for Analysis of Gene Function

(2011) Heriberto Cerutti et al.   EUKARYOTIC CELL

Whole-genome amplification (WGA) of marine photosynthetic eukaryote populations

(2011) Cécile Lepere et al.   FEMS MICROBIOLOGY ECOLOGY

Unveiling the transcriptional features associated with coccolithovirus infection of natural Emiliania huxleyi blooms

(2011) António Pagarete et al.   FEMS MICROBIOLOGY ECOLOGY

MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs

(2011) J. Zhai et al.   GENES & DEVELOPMENT

Dynamics of Gene Duplication in the Genomes of Chlorophyll d-Producing Cyanobacteria: Implications for the Ecological Niche

(2011) Scott R. Miller et al.   Genome Biology and Evolution

Evolution Under Environmental Stress at Macro- and Microscales

(2011) Eviatar Nevo   Genome Biology and Evolution

Pathogen Recognition by the Innate Immune System

(2011) Himanshu Kumar et al.   INTERNATIONAL REVIEWS OF IMMUNOLOGY

Heterotrophic organisms dominate nitrogen fixation in the South Pacific Gyre

(2011) Hannah Halm et al.   ISME Journal

Novel lineages of Prochlorococcus and Synechococcus in the global oceans

(2011) Sijun Huang et al.   ISME Journal

Transcriptome response of high- and low-light-adapted Prochlorococcus strains to changing iron availability

(2011) Anne W Thompson et al.   ISME Journal

Algal models in plant biology

(2011) J. M. Cock et al.   JOURNAL OF EXPERIMENTAL BOTANY

COMPARISON OF CULTURED TRICHODESMIUM (CYANOPHYCEAE) WITH SPECIES CHARACTERIZED FROM THE FIELD1

(2011) Annette M. Hynes et al.   JOURNAL OF PHYCOLOGY

Genomic scans detect signatures of selection along a salinity gradient in populations of the intertidal seaweed Fucus serratus on a 12km scale

(2011) J.A. Coyer et al.   Marine Genomics

Highly Dynamic Exon Shuffling in Candidate Pathogen Receptors ... What if Brown Algae Were Capable of Adaptive Immunity?

(2011) A. Zambounis et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evidence for Horizontal Gene Transfer from Bacteroidetes Bacteria to Dinoflagellate Minicircles

(2011) Krzysztof Moszczyński et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic island variability facilitates Prochlorococcus–virus coexistence

(2011) Sarit Avrani et al.   NATURE

ProPortal: a resource for integrated systems biology of Prochlorococcus and its phage

(2011) L. Kelly et al.   NUCLEIC ACIDS RESEARCH

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

(2011) I. Pagani et al.   NUCLEIC ACIDS RESEARCH

Integrative analysis of metabolite and transcript abundance during the short-term response to saline and oxidative stress in the brown alga Ectocarpus siliculosus

(2011) SIMON M. DITTAMI et al.   PLANT CELL AND ENVIRONMENT

The Response of Diatom Central Carbon Metabolism to Nitrogen Starvation Is Different from That of Green Algae and Higher Plants

(2011) N. L. Hockin et al.   PLANT PHYSIOLOGY

Variation in Tropical Reef Symbiont Metagenomes Defined by Secondary Metabolism

(2011) Mohamed S. Donia et al.   PLoS One

Diurnal Rhythms Result in Significant Changes in the Cellular Protein Complement in the Cyanobacterium Cyanothece 51142

(2011) Jana Stöckel et al.   PLoS One

Adaptive Traits Are Maintained on Steep Selective Gradients despite Gene Flow and Hybridization in the Intertidal Zone

(2011) Gerardo I. Zardi et al.   PLoS One

Plastid 16S rRNA Gene Diversity among Eukaryotic Picophytoplankton Sorted by Flow Cytometry from the South Pacific Ocean

(2011) Xiao Li Shi et al.   PLoS One

Characterization of the Small RNA Transcriptome of the Diatom, Thalassiosira pseudonana

(2011) Trina M. Norden-Krichmar et al.   PLoS One

A Molecular Insight into Algal-Oomycete Warfare: cDNA Analysis of Ectocarpus siliculosus Infected with the Basal Oomycete Eurychasma dicksonii

(2011) Laura Grenville-Briggs et al.   PLoS One

Diversity and Dynamics of a Widespread Bloom of the Toxic Dinoflagellate Alexandrium fundyense

(2011) Deana L. Erdner et al.   PLoS One

OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus

(2011) S. M. Coelho et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Complex microbiome underlying secondary and primary metabolism in the tunicate-Prochloron symbiosis

(2011) M. S. Donia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics

(2011) C. J. Gobler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic insights into the physiology and ecology of the marine filamentous cyanobacterium Lyngbya majuscula

(2011) A. C. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Warming will affect phytoplankton differently: evidence through a mechanistic approach

(2011) I. E. Huertas et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Physiological and Molecular Evidence that Environmental Changes Elicit Morphological Interconversion in the Model Diatom Phaeodactylum tricornutum

(2011) Alessandra De Martino et al.   PROTIST

Single-Cell Genomics Reveals Organismal Interactions in Uncultivated Marine Protists

(2011) H. S. Yoon et al.   SCIENCE

The evolution of gene expression and the transcriptome–phenotype relationship

(2011) Peter W. Harrison et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Origin of eukaryotic cells: 40 years on

(2011) John M. Archibald   SYMBIOSIS

The molecular origins of evolutionary innovations

(2011) Andreas Wagner   TRENDS IN GENETICS

The spontaneous mutation frequencies of Prochlorococcus strains are commensurate with those of other bacteria

(2011) Marcia S. Osburne et al.   Environmental Microbiology Reports

A Holistic Approach to Marine Eco-Systems Biology

(2011) Eric Karsenti et al.   PLOS BIOLOGY

Two Strains of Crocosphaera watsonii with Highly Conserved Genomes are Distinguished by Strain-Specific Features

(2011) Shellie R. Bench et al.   Frontiers in Microbiology

Dinoflagellate Genome Evolution

(2010) Jennifer H. Wisecaver et al.   Annual Review of Microbiology

Genome size differentiates co-occurring populations of the planktonic diatom Ditylum brightwellii (Bacillariophyta)

(2010) Julie A Koester et al.   BMC EVOLUTIONARY BIOLOGY

Ultraviolet stress delays chromosome replication in light/dark synchronized cells of the marine cyanobacterium Prochlorococcus marinus PCC9511

(2010) Christian Kolowrat et al.   BMC MICROBIOLOGY

Diatom cell division in an environmental context

(2010) Chris Bowler et al.   CURRENT OPINION IN PLANT BIOLOGY

Abundance and distribution of major groups of diazotrophic cyanobacteria and their potential contribution to N2 fixation in the tropical Atlantic Ocean

(2010) Nicole L. Goebel et al.   ENVIRONMENTAL MICROBIOLOGY

Diel cycling of DNA staining and nifH gene regulation in the unicellular cyanobacterium Crocosphaera watsonii strain WH 8501 (Cyanophyta)

(2010) Kory Pennebaker et al.   ENVIRONMENTAL MICROBIOLOGY

Use of  flow cytometric sorting to better assess the diversity of small photosynthetic eukaryotes in the English Channel

(2010) Dominique Marie et al.   FEMS MICROBIOLOGY ECOLOGY

Complete Nucleomorph Genome Sequence of the Nonphotosynthetic Alga Cryptomonas paramecium Reveals a Core Nucleomorph Gene Set

(2010) Goro Tanifuji et al.   Genome Biology and Evolution

A new chlorophyll d-containing cyanobacterium: evidence for niche adaptation in the genus Acaryochloris

(2010) Remus Mohr et al.   ISME Journal

Genome-wide analysis of diel gene expression in the unicellular N2-fixing cyanobacterium Crocosphaera watsonii WH 8501

(2010) Tuo Shi et al.   ISME Journal

Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans

(2010) Rex R Malmstrom et al.   ISME Journal

A novel clade of Prochlorococcus found in high nutrient low chlorophyll waters in the South and Equatorial Pacific Ocean

(2010) Nyree J West et al.   ISME Journal

PtrA is required for coordinate regulation of gene expression during phosphate stress in a marine Synechococcus

(2010) Martin Ostrowski et al.   ISME Journal

Endolithic chlorophyll d-containing phototrophs

(2010) Lars Behrendt et al.   ISME Journal

Significant CO2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean

(2010) Ludwig Jardillier et al.   ISME Journal

CpeS Is a Lyase Specific for Attachment of3Z-PEB to Cys82of β-phycoerythrin fromProchlorococcus marinusMED4

(2010) Jessica Wiethaus et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Marine Prasinovirus Genomes Show Low Evolutionary Divergence and Acquisition of Protein Metabolism Genes by Horizontal Gene Transfer

(2010) H. Moreau et al.   JOURNAL OF VIROLOGY

Differential Gene Retention in Plastids of Common Recent Origin

(2010) A. Reyes-Prieto et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

(2010) J. Mark Cock et al.   NATURE

Metabolic streamlining in an open-ocean nitrogen-fixing cyanobacterium

(2010) H. James Tripp et al.   NATURE

Diurnal oscillations of metabolite abundances and gene analysis provide new insights into central metabolic processes of the brown alga Ectocarpus siliculosus

(2010) Antoine Gravot et al.   NEW PHYTOLOGIST

The cell wall polysaccharide metabolism of the brown alga Ectocarpus siliculosus. Insights into the evolution of extracellular matrix polysaccharides in Eukaryotes

(2010) Gurvan Michel et al.   NEW PHYTOLOGIST

The Ectocarpus genome sequence: insights into brown algal biology and the evolutionary diversity of the eukaryotes

(2010) J. Mark Cock et al.   NEW PHYTOLOGIST

Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes

(2010) Gurvan Michel et al.   NEW PHYTOLOGIST

Reinstatement of Ectocarpus crouaniorum Thuret in Le Jolis as a third common species of Ectocarpus (Ectocarpales, Phaeophyceae) in Western Europe, and its phenology at Roscoff, Brittany

(2010) Akira F. Peters et al.   PHYCOLOGICAL RESEARCH

Transcriptome Profiling of a Toxic Dinoflagellate Reveals a Gene-Rich Protist and a Potential Impact on Gene Expression Due to Bacterial Presence

(2010) Ahmed Moustafa et al.   PLoS One

The Smallest Known Genomes of Multicellular and Toxic Cyanobacteria: Comparison, Minimal Gene Sets for Linked Traits and the Evolutionary Implications

(2010) Karina Stucken et al.   PLoS One

Ecosystem-specific selection pressures revealed through comparative population genomics

(2010) M. L. Coleman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Limits to gene flow in a cosmopolitan marine planktonic diatom

(2010) G. Casteleyn et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An atypical member of the light-harvesting complex stress-related protein family modulates diatom responses to light

(2010) B. Bailleul et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of Prochlorococcus clades from iron-depleted oceanic regions

(2010) D. B. Rusch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton

(2010) M. L. Cuvelier et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Copper stress proteomics highlights local adaptation of two strains of the model brown alga Ectocarpus siliculosus

(2010) Andrés Ritter et al.   PROTEOMICS

Unicellular Cyanobacterial Distributions Broaden the Oceanic N2 Fixation Domain

(2010) P. H. Moisander et al.   SCIENCE

Genomic insights into photosynthesis in eukaryotic phytoplankton

(2010) Giovanni Finazzi et al.   TRENDS IN PLANT SCIENCE

Algal diseases: spotlight on a black box

(2010) Claire M.M. Gachon et al.   TRENDS IN PLANT SCIENCE

Genome-wide analysis of the diatom cell cycle unveils a novel type of cyclins involved in environmental signaling

(2010) Marie JJ Huysman et al.   GENOME BIOLOGY

Prochlorococcus: Advantages and Limits of Minimalism

(2009) Frédéric Partensky et al.   Annual Review of Marine Science

Deciphering diatom biochemical pathways via whole-cell proteomics

(2009) BL Nunn et al.   AQUATIC MICROBIAL ECOLOGY

Differential responses to copper-induced oxidative stress in the marine macroalgae Lessonia nigrescens and Scytosiphon lomentaria (Phaeophyceae)

(2009) Loretto Contreras et al.   AQUATIC TOXICOLOGY

Sizing up the genomic footprint of endosymbiosis

(2009) Marek Elias et al.   BIOESSAYS

Rapid speciation in a newly opened postglacial marine environment, the Baltic Sea

(2009) Ricardo T Pereyra et al.   BMC EVOLUTIONARY BIOLOGY

A single origin of the photosynthetic organelle in different Paulinella lineages

(2009) Hwan Su Yoon et al.   BMC EVOLUTIONARY BIOLOGY

Plastid genomes of two brown algae, Ectocarpus siliculosus and Fucus vesiculosus: further insights on the evolution of red-algal derived plastids

(2009) Gildas Le Corguillé et al.   BMC EVOLUTIONARY BIOLOGY

Effect of continuous light on diurnal rhythms in Cyanothece sp. ATCC 51142

(2009) Thanura Elvitigala et al.   BMC GENOMICS

Are algal genes in nonphotosynthetic protists evidence of historical plastid endosymbioses?

(2009) John W Stiller et al.   BMC GENOMICS

Small RNAs as Guardians of the Genome

(2009) Colin D. Malone et al.   CELL

The Puzzle of Plastid Evolution

(2009) John M. Archibald   CURRENT BIOLOGY

Detection and expression of the phosphonate transporter genephnDin marine and freshwater picocyanobacteria

(2009) Irina N. Ilikchyan et al.   ENVIRONMENTAL MICROBIOLOGY

Comparative genomics of marine cyanomyoviruses reveals the widespread occurrence ofSynechococcushost genes localized to a hyperplastic region: implications for mechanisms of cyanophage evolution

(2009) Andrew D. Millard et al.   ENVIRONMENTAL MICROBIOLOGY

Photosynthetic picoeukaryote community structure in the South East Pacific Ocean encompassing the most oligotrophic waters on Earth

(2009) Cécile Lepère et al.   ENVIRONMENTAL MICROBIOLOGY

Occurrence of phosphate acquisition genes inProchlorococcuscells from different ocean regions

(2009) Adam C. Martiny et al.   ENVIRONMENTAL MICROBIOLOGY

Diel rhythm of nitrogen and carbon metabolism in the unicellular, diazotrophic cyanobacteriumCrocosphaera watsoniiWH8501

(2009) Wiebke Mohr et al.   ENVIRONMENTAL MICROBIOLOGY

Ultrastructural and microspectrophotometric characterization of multiple species of cyanobacterial photosymbionts coexisting in the colonial ascidianTrididemnum clinides(Tunicata, Ascidiacea, Didemnidae)

(2009) Euichi Hirose et al.   EUROPEAN JOURNAL OF PHYCOLOGY

Large-Scale Phylogenomic Analyses Reveal That Two Enigmatic Protist Lineages, Telonemia and Centroheliozoa, Are Related to Photosynthetic Chromalveolates

(2009) Fabien Burki et al.   Genome Biology and Evolution

Timing of morphological and ecological innovations in the cyanobacteria – a key to understanding the rise in atmospheric oxygen

(2009) C. E. BLANK et al.   Geobiology

In situ transcriptomic analysis of the globally important keystone N2-fixing taxon Crocosphaera watsonii

(2009) Ian Hewson et al.   ISME Journal

Microarray analysis of phosphate regulation in the marine cyanobacterium Synechococcus sp. WH8102

(2009) Sasha G Tetu et al.   ISME Journal

Biochemical Evidence for a Timing Mechanism in Prochlorococcus

(2009) I. M. Axmann et al.   JOURNAL OF BACTERIOLOGY

Frayed at the edges: selective pressure and adaptive response to abiotic stressors are mismatched in low diversity edge populations

(2009) Gareth A. Pearson et al.   JOURNAL OF ECOLOGY

Chromalveolates and the Evolution of Plastids by Secondary Endosymbiosis

(2009) PATRICK J. KEELING   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Going, Going, Not Quite Gone: Nucleomorphs as a Case Study in Nuclear Genome Reduction

(2009) J. M. Archibald et al.   JOURNAL OF HEREDITY

Analysis of Nanoplankton Community Structure Using Flow Sorting and Molecular Techniques

(2009) Noriaki Yoshida et al.   MICROBES AND ENVIRONMENTS

Ecological Genomics of Marine Picocyanobacteria

(2009) D. J. Scanlan et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Cryptic Sex in the Smallest Eukaryotic Marine Green Alga

(2009) N. Grimsley et al.   MOLECULAR BIOLOGY AND EVOLUTION

Gene Sampling Can Bias Multi-Gene Phylogenetic Inferences: The Relationship between Red Algae and Green Plants as a Case Study

(2009) Y. Inagaki et al.   MOLECULAR BIOLOGY AND EVOLUTION

An ancient light-harvesting protein is critical for the regulation of algal photosynthesis

(2009) Graham Peers et al.   NATURE

Gene silencing in the marine diatom Phaeodactylum tricornutum

(2009) Valentina De Riso et al.   NUCLEIC ACIDS RESEARCH

Choreography of the Transcriptome, Photophysiology, and Cell Cycle of a Minimal Photoautotroph, Prochlorococcus

(2009) Erik R. Zinser et al.   PLoS One

Whole Genome Amplification and De novo Assembly of Single Bacterial Cells

(2009) Sébastien Rodrigue et al.   PLoS One

Distinct Gene Number-Genome Size Relationships for Eukaryotes and Non-Eukaryotes: Gene Content Estimation for Dinoflagellate Genomes

(2009) Yubo Hou et al.   PLoS One

Molecular Phylogeny and Description of the Novel Katablepharid Roombia truncata gen. et sp. nov., and Establishment of the Hacrobia Taxon nov

(2009) Noriko Okamoto et al.   PLoS One

Groups without Cultured Representatives Dominate Eukaryotic Picophytoplankton in the Oligotrophic South East Pacific Ocean

(2009) Xiao Li Shi et al.   PLoS One

Extreme diversity in noncalcifying haptophytes explains a major pigment paradox in open oceans

(2009) H. Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Seven Gene Phylogeny of Heterokonts

(2009) Ingvild Riisberg et al.   PROTIST

Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas

(2009) A. Z. Worden et al.   SCIENCE

Genomic Footprints of a Cryptic Plastid Endosymbiosis in Diatoms

(2009) A. Moustafa et al.   SCIENCE

Evidence for Ecological Speciation and Its Alternative

(2009) D. Schluter   SCIENCE

Diatom genomes come of age

(2009) Assaf Vardi et al.   GENOME BIOLOGY

Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell

(2009) Peter von Dassow et al.   GENOME BIOLOGY

Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress

(2009) Simon M Dittami et al.   GENOME BIOLOGY

Genomic Insights into Marine Microalgae

(2008) Micaela S. Parker et al.   Annual Review of Genetics

Abundances and Distributions of the Dominant nifH Phylotypes in the Northern Atlantic Ocean

(2008) R. J. Langlois et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

In search of new tractable diatoms for experimental biology

(2008) Victor A. Chepurnov et al.   BIOESSAYS

Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes

(2008) F. Burki et al.   Biology Letters

Diversity and evolution of marine phytoplankton

(2008) Nathalie Simon et al.   COMPTES RENDUS BIOLOGIES

Chromatophore Genome Sequence of Paulinella Sheds Light on Acquisition of Photosynthesis by Eukaryotes

(2008) Eva C.M. Nowack et al.   CURRENT BIOLOGY

Unveiling new microbial eukaryotes in the surface ocean

(2008) Ramon Massana et al.   CURRENT OPINION IN MICROBIOLOGY

Wide genetic diversity of picoplanktonic green algae (Chloroplastida) in the Mediterranean Sea uncovered by a phylum-biased PCR approach

(2008) Manon Viprey et al.   ENVIRONMENTAL MICROBIOLOGY

Widespread occurrence and genetic diversity of marine parasitoids belonging toSyndiniales(Alveolata)

(2008) L. Guillou et al.   ENVIRONMENTAL MICROBIOLOGY

Phenotypic and genotypic characterization of multiple strains of the diazotrophic cyanobacterium,Crocosphaera watsonii, isolated from the open ocean

(2008) Eric A. Webb et al.   ENVIRONMENTAL MICROBIOLOGY

CoastalSynechococcusmetagenome reveals major roles for horizontal gene transfer and plasmids in population diversity

(2008) B. Palenik et al.   ENVIRONMENTAL MICROBIOLOGY

Diversity and dynamics of Antarctic marine microbial eukaryotes under manipulated environmental UV radiation

(2008) Anouk M.-T. Piquet et al.   FEMS MICROBIOLOGY ECOLOGY

Something from (almost) nothing: the impact of multiple displacement amplification on microbial ecology

(2008) Erik K Binga et al.   ISME Journal

Diversity and abundance of diazotrophic microorganisms in the South China Sea during intermonsoon

(2008) Pia H Moisander et al.   ISME Journal

Differential Transcriptional Analysis of the Cyanobacterium Cyanothece sp. Strain ATCC 51142 during Light-Dark and Continuous-Light Growth

(2008) J. Toepel et al.   JOURNAL OF BACTERIOLOGY

Genome Streamlining Results in Loss of Robustness of the Circadian Clock in the Marine Cyanobacterium Prochlorococcus marinus PCC 9511

(2008) Julia Holtzendorff et al.   JOURNAL OF BIOLOGICAL RHYTHMS

Nuclear Genome Sequence Survey of the DinoflagellateHeterocapsa triquetra

(2008) MICHELLE McEWAN et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

The ecology and phylogeny of cyanobacterial symbionts in sponges

(2008) Kayley M. Usher   Marine Ecology-An Evolutionary Perspective

Genetic Diversity in the Paramecium aurelia Species Complex

(2008) F. Catania et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Chloroplast Genomes of the Green Algae Pyramimonas, Monomastix, and Pycnococcus Shed New light on the Evolutionary History of Prasinophytes and the Origin of the Secondary Chloroplasts of Euglenids

(2008) Monique Turmel et al.   MOLECULAR BIOLOGY AND EVOLUTION

Clues about the Genetic Basis of Adaptation Emerge from Comparing the Proteomes of Two Ostreococcus Ecotypes (Chlorophyta, Prasinophyceae)

(2008) S. Jancek et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Phaeodactylum genome reveals the evolutionary history of diatom genomes

(2008) Chris Bowler et al.   NATURE

Horizontal gene transfer in eukaryotic evolution

(2008) Patrick J. Keeling et al.   NATURE REVIEWS GENETICS

Sympatric, parapatric or allopatric: the most important way to classify speciation?

(2008) R. K Butlin et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL

A Model for Carbohydrate Metabolism in the Diatom Phaeodactylum tricornutum Deduced from Comparative Whole Genome Analysis

(2008) Peter G. Kroth et al.   PLoS One

EEF2 Analysis Challenges the Monophyly of Archaeplastida and Chromalveolata

(2008) Eunsoo Kim et al.   PLoS One

From Stop to Start: Tandem Gene Arrangement, Copy Number and Trans-Splicing Sites in the Dinoflagellate Amphidinium carterae

(2008) Tsvetan R. Bachvaroff et al.   PLoS One

Whole-genome analysis reveals molecular innovations and evolutionary transitions in chromalveolate species

(2008) C. Martens et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The "Cheshire Cat" escape strategy of the coccolithophore Emiliania huxleyi in response to viral infection

(2008) M. Frada et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina

(2008) W. D. Swingley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle

(2008) E. A. Welsh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation

(2008) A. E. Allen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses

(2008) T. Mock et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Aurearenophyceae classis nova, a New Class of Heterokontophyta Based on a New Marine Unicellular Alga Aurearena cruciata gen. et sp. nov. Inhabiting Sandy Beaches

(2008) Atsushi Kai et al.   PROTIST

Molecular Systematics and the Diatom Species

(2008) Andrew J. Alverson   PROTIST

Globally Distributed Uncultivated Oceanic N2-Fixing Cyanobacteria Lack Oxygenic Photosystem II

(2008) J. P. Zehr et al.   SCIENCE

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE

Unravelling the genomic mosaic of a ubiquitous genus of marine cyanobacteria

(2008) Alexis Dufresne et al.   GENOME BIOLOGY

Pseudo-nitzschia pungens (Bacillariophyceae): A cosmopolitan diatom species?

(2007) Griet Casteleyn et al.   HARMFUL ALGAE

Metabolic Symbiosis and the Birth of the Plant Kingdom

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