RNA-seq-based comparative transcriptome analysis of the syngas-utilizing bacterium Clostridium ljungdahlii DSM 13528 grown autotrophically and heterotrophically

Cre-lox66/lox71-Based Elimination of Phosphotransacetylase or Acetaldehyde Dehydrogenase Shifted Carbon Flux in Acetogen Rendering Selective Overproduction of Ethanol or Acetate

(2012) Vel Berzin et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Energy conservation via electron bifurcating ferredoxin reduction and proton/Na+ translocating ferredoxin oxidation

(2012) Wolfgang Buckel et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Genome-wide identification of novel small RNAs in Pseudomonas aeruginosa

(2012) María Gómez-Lozano et al.   ENVIRONMENTAL MICROBIOLOGY

Pathway engineering and synthetic biology using acetogens

(2012) Bettina Schiel-Bengelsdorf et al.   FEBS LETTERS

Transient B12-Dependent Methyltransferase Complexes Revealed by Small-Angle X-ray Scattering

(2012) Nozomi Ando et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

RNA-Seq Based Transcriptional Map of Bovine Respiratory Disease Pathogen “Histophilus somni 2336”

(2012) Ranjit Kumar et al.   PLoS One

Mechanism Analysis of Acid Tolerance Response of Bifidobacterium longum subsp. longum BBMN 68 by Gene Expression Profile Using RNA-Sequencing

(2012) Junhua Jin et al.   PLoS One

The Rnf Complex of Clostridium ljungdahlii Is a Proton-Translocating Ferredoxin:NAD+ Oxidoreductase Essential for Autotrophic Growth

(2012) P.-L. Tremblay et al.   mBio

Anaerobes: A piece in the puzzle for alternative biofuels

(2011) Paul A. Lawson et al.   ANAEROBE

Single-nucleotide resolution analysis of the transcriptome structure of Clostridium beijerinckii NCIMB 8052 using RNA-Seq

(2011) Yi Wang et al.   BMC GENOMICS

Vitamin B12-derivatives—enzyme cofactors and ligands of proteins and nucleic acids

(2011) Karl Gruber et al.   CHEMICAL SOCIETY REVIEWS

Identification and Role of Regulatory Non-Coding RNAs in Listeria monocytogenes

(2011) Benjamin Izar et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Evaluation of candidate reference genes in Clostridium difficile for gene expression normalization

(2010) Devon Metcalf et al.   ANAEROBE

The primary transcriptome of the major human pathogen Helicobacter pylori

(2010) Cynthia M. Sharma et al.   NATURE

Clostridium ljungdahlii represents a microbial production platform based on syngas

(2010) M. Kopke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

Regulatory RNAs in Bacteria

(2009) Lauren S. Waters et al.   CELL

Clip domain serine protease and its homolog respond to Vibrio challenge in Chinese white shrimp, Fenneropenaeus chinensis

(2009) Qian Ren et al.   FISH & SHELLFISH IMMUNOLOGY

A single-base resolution map of an archaeal transcriptome

(2009) O. Wurtzel et al.   GENOME RESEARCH

Cobalamin-dependent and cobamide-dependent methyltransferases

(2008) Rowena G Matthews et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

(2008) R. D. Morin et al.   GENOME RESEARCH

DOOR: a database for prokaryotic operons

(2008) Fenglou Mao et al.   NUCLEIC ACIDS RESEARCH

Redox-Active Antibiotics Control Gene Expression and Community Behavior in Divergent Bacteria

(2008) L. E. P. Dietrich et al.   SCIENCE