Evolution of the Eye Transcriptome under Constant Darkness in Sinocyclocheilus Cavefish

Transcriptome analysis reveals the time of the fourth round of genome duplication in common carp (Cyprinus carpio)

(2012) Jin-Tu Wang et al.   BMC GENOMICS

Conserved Expression Signatures between Medaka and Human Pigment Cell Tumors

(2012) Manfred Schartl et al.   PLoS One

The role of Zic family zinc finger transcription factors in the proliferation and differentiation of retinal progenitor cells

(2011) Yui Watabe et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Restoring eye size in Astyanax mexicanus blind cavefish embryos through modulation of the Shh and Fgf8 forebrain organising centres

(2011) K. Pottin et al.   DEVELOPMENT

Expression of interleukin-4 receptor α in human corneal epithelial cells

(2011) Mayumi Ueta et al.   JAPANESE JOURNAL OF OPHTHALMOLOGY

Out of sight out of mind: current knowledge of Chinese cave fishes

(2011) Y.-H. Zhao et al.   JOURNAL OF FISH BIOLOGY

Genome duplication in amphibians and fish: an extended synthesis

(2011) B. K. Mable et al.   JOURNAL OF ZOOLOGY

Parallel speciation in Astyanax cave fish (Teleostei) in Northern Mexico

(2011) Ulrike Strecker et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

Computational analysis of tissue-specific gene networks: application to murine retinal functional studies

(2010) Jianfei Hu et al.   BIOINFORMATICS

Phototransduction and the Evolution of Photoreceptors

(2010) Gordon L. Fain et al.   CURRENT BIOLOGY

Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina

(2010) Anand Swaroop et al.   NATURE REVIEWS NEUROSCIENCE

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Regressive Evolution inAstyanaxCavefish

(2009) William R. Jeffery   Annual Review of Genetics

Reduced opsin gene expression in a cave-dwelling fish

(2009) M. Tobler et al.   Biology Letters

EVOLUTION FROM FISH TO MAMMALS BY GENE DUPLICATION

(2009) SUSUMU OHNO et al.   HEREDITAS

NR2E3mutations in enhanced S-cone sensitivity syndrome (ESCS), Goldmann-Favre syndrome (GFS), clumped pigmentary retinal degeneration (CPRD), and retinitis pigmentosa (RP)

(2009) Daniel F. Schorderet et al.   HUMAN MUTATION

Differentially expressed genes identified by cross-species microarray in the blind cavefish Astyanax

(2009) Allen G. STRICKLER et al.   Integrative Zoology

Exploring factors shaping population genetic structure of the freshwater fishSinocyclocheilus grahami(Teleostei, Cyprinidae)

(2009) S.Y. Chen et al.   JOURNAL OF FISH BIOLOGY

Photoreceptor degeneration and retinal inflammation induced by very low-density lipoprotein receptor deficiency

(2009) Ying Chen et al.   MICROVASCULAR RESEARCH

The complete mitochondrial genomes of two species from Sinocyclocheilus (Cypriniformes: Cyprinidae) and a phylogenetic analysis within Cyprininae

(2009) Xiaoyun Wu et al.   MOLECULAR BIOLOGY REPORTS

A Novel Role for Mc1r in the Parallel Evolution of Depigmentation in Independent Populations of the Cavefish Astyanax mexicanus

(2009) Joshua B. Gross et al.   PLoS Genetics

Rocky Desertification, Antidesertification, and Sustainable Development in the Karst Mountain Region of Southwest China

(2008) Qiuhao Huang et al.   AMBIO

Restoring sight in blind cavefish

(2008) Richard Borowsky   CURRENT BIOLOGY

Evolution of Otx paralogue usages in early patterning of the vertebrate head

(2008) Yoko Suda et al.   DEVELOPMENTAL BIOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Optimal Data Partitioning and a Test Case for Ray-Finned Fishes (Actinopterygii) Based on Ten Nuclear Loci

(2008) Chenhong Li et al.   SYSTEMATIC BIOLOGY

Evolutionary mutant models for human disease

(2008) R. Craig Albertson et al.   TRENDS IN GENETICS

Regulation of photoreceptor gene expression by Crx-associated transcription factor network

(2007) Anne K. Hennig et al.   BRAIN RESEARCH