Ecological Adaptation in Bacteria: Speciation Driven by Codon Selection

Quantification of codon selection for comparative bacterial genomics

(2011) Adam C Retchless et al.   BMC GENOMICS

Comprehensive prediction of chromosome dimer resolution sites in bacterial genomes

(2011) Nobuaki Kono et al.   BMC GENOMICS

Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species

(2011) C. Luo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The myth of bacterial species and speciation

(2010) Jeffrey G. Lawrence et al.   BIOLOGY & PHILOSOPHY

Synonymous but not the same: the causes and consequences of codon bias

(2010) Joshua B. Plotkin et al.   NATURE REVIEWS GENETICS

Phylogenetic incongruence arising from fragmented speciation in enteric bacteria

(2010) A. C. Retchless et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cryptic Lineages of the Genus Escherichia

(2009) S. T. Walk et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The NIH Human Microbiome Project

(2009) et al.   GENOME RESEARCH