Stable Isotope Labeling with Amino Acids in Cell Culture (SILAC)-Based Strategy for Proteome-Wide Thermodynamic Analysis of Protein-Ligand Binding Interactions

Mass Spectrometry Based Method to Increase Throughput for Kinome Analyses Using ATP Probes

(2013) F. E. McAllister et al.   ANALYTICAL CHEMISTRY

Methods for the Elucidation of Protein-Small Molecule Interactions

(2013) Amanda McFedries et al.   CHEMISTRY & BIOLOGY

Profiling Protein Kinases and Other ATP Binding Proteins in Arabidopsis Using Acyl-ATP Probes

(2013) Joji Grace Villamor et al.   MOLECULAR & CELLULAR PROTEOMICS

A Chemical Proteomics Approach to Profiling the ATP-binding Proteome ofMycobacterium tuberculosis

(2013) Lisa M. Wolfe et al.   MOLECULAR & CELLULAR PROTEOMICS

Selective Stabilization of a Partially Unfolded Protein by a Metabolite

(2012) Pei-Fen Liu et al.   JOURNAL OF MOLECULAR BIOLOGY

Target Identification by Chromatographic Co-elution: Monitoring of Drug-Protein Interactions without Immobilization or Chemical Derivatization

(2012) Janet N. Y. Chan et al.   MOLECULAR & CELLULAR PROTEOMICS

Thermodynamic analysis of protein-ligand binding interactions in complex biological mixtures using the stability of proteins from rates of oxidation

(2012) Erin C Strickland et al.   Nature Protocols

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

(2012) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Simplified proteomics approach to discover protein-ligand interactions

(2012) Youngil Chang et al.   PROTEIN SCIENCE

Mass Spectrometry- and Lysine Amidination-Based Protocol for Thermodynamic Analysis of Protein Folding and Ligand Binding Interactions

(2011) Ying Xu et al.   ANALYTICAL CHEMISTRY

Slow Histidine H/D Exchange Protocol for Thermodynamic Analysis of Protein Folding and Stability Using Mass Spectrometry

(2011) Duc T. Tran et al.   ANALYTICAL CHEMISTRY

In Situ Kinase Profiling Reveals Functionally Relevant Properties of Native Kinases

(2011) Matthew P. Patricelli et al.   CHEMISTRY & BIOLOGY

Energetics-Based Discovery of Protein–Ligand Interactions on a Proteomic Scale

(2011) Pei-Fen Liu et al.   JOURNAL OF MOLECULAR BIOLOGY

Thermodynamic Analysis of Protein–Ligand Interactions in Complex Biological Mixtures using a Shotgun Proteomics Approach

(2011) Patrick D. DeArmond et al.   JOURNAL OF PROTEOME RESEARCH

Quantitative proteomics approach for identifying protein-drug interactions in complex mixtures using protein stability measurements

(2010) G. M. West et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An integrated workflow for charting the human interaction proteome: insights into the PP2A system

(2009) Timo Glatter et al.   Molecular Systems Biology

Identifying the proteins to which small-molecule probes and drugs bind in cells

(2009) S.-E. Ong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Target identification using drug affinity responsive target stability (DARTS)

(2009) B. Lomenick et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Thermodynamic Analysis of Protein Stability and Ligand Binding Using a Chemical Modification- and Mass Spectrometry-Based Strategy

(2008) Graham M. West et al.   ANALYTICAL CHEMISTRY

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY